About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_50392-4.15DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
Bpl_scaf_50392-4.19
Bpl_scaf_50392-4.28
Bpl_scaf_50392-4.32TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Bpl_scaf_50392-4.8
Bpl_scaf_50392-4.9PALMITOYLTRANSFERASE ZDHHC16
Bpl_scaf_50394-0.4
Bpl_scaf_50403-0.3
Bpl_scaf_50403-0.8
Bpl_scaf_50403-0.9
Bpl_scaf_50404-0.9DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_50404-1.12
Bpl_scaf_50404-1.6
Bpl_scaf_50404-1.9EXPRESSED PROTEIN
Bpl_scaf_50404-2.10E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Bpl_scaf_50404-2.11PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_50404-2.5DIHYDROPTERIDINE REDUCTASE
Bpl_scaf_50404-3.3COMPLEXIN
Bpl_scaf_50404-4.13RING-H2 FINGER PROTEIN ATL67
Bpl_scaf_50404-4.14DACTYLIN
Bpl_scaf_50405-0.6POLYCYSTIN-1
Bpl_scaf_50405-0.7
Bpl_scaf_50441-0.5PROTEIN SIDEKICK
Bpl_scaf_50451-0.4
Bpl_scaf_50451-0.5CEREBELLIN-RELATED
Bpl_scaf_50459-0.1
Bpl_scaf_50475-0.5GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Bpl_scaf_50488-0.16ZINC FINGER PROTEIN
Bpl_scaf_50488-0.17CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_50503-0.10
Bpl_scaf_50503-0.8
Bpl_scaf_50503-0.9
Bpl_scaf_50506-0.13NG37
Bpl_scaf_50506-0.17
Bpl_scaf_50506-0.8
Bpl_scaf_50515-0.2
Bpl_scaf_50515-0.5AMINO ACID TRANSPORTER
Bpl_scaf_50528-0.2IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Bpl_scaf_50550-0.0
Bpl_scaf_50550-0.27
Bpl_scaf_50550-0.3
Bpl_scaf_50559-0.10
Bpl_scaf_50559-0.9
Bpl_scaf_50560-0.12
Bpl_scaf_50569-0.5
Bpl_scaf_50569-0.6
Bpl_scaf_50569-0.8LATROPHILIN RECEPTOR-LIKE PROTEIN A
Bpl_scaf_50591-0.0
Bpl_scaf_506-0.0PROTEIN STAR
Bpl_scaf_506-0.12ZINC FINGER AND SCAN DOMAIN-CONTAINING
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