About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_50109-2.32
Bpl_scaf_50109-2.9
Bpl_scaf_50112-0.0
Bpl_scaf_50120-0.0
Bpl_scaf_50121-0.4PROPERDIN
Bpl_scaf_50121-1.11
Bpl_scaf_50121-1.12ENDONUCLEASE RELATED
Bpl_scaf_50121-1.13
Bpl_scaf_50121-1.17
Bpl_scaf_50121-2.15ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_50121-2.23
Bpl_scaf_50121-2.27SURFEIT LOCUS PROTEIN 6
Bpl_scaf_50121-2.28SURFEIT LOCUS PROTEIN 2
Bpl_scaf_50121-2.31PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_50121-2.37PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1
Bpl_scaf_50121-2.38UNCHARACTERIZED
Bpl_scaf_50121-2.39UNCHARACTERIZED
Bpl_scaf_50131-0.0
Bpl_scaf_50134-0.2SOLUTE CARRIER FAMILY 13 MEMBER
Bpl_scaf_50138-0.0
Bpl_scaf_50141-0.3
Bpl_scaf_50143-1.3
Bpl_scaf_50143-2.0CEREBELLIN-RELATED
Bpl_scaf_50143-2.1
Bpl_scaf_50143-2.3
Bpl_scaf_50143-2.4
Bpl_scaf_5027-0.1
Bpl_scaf_5027-0.3
Bpl_scaf_50279-0.16
Bpl_scaf_50279-0.17H2HPP ISOMERASE
Bpl_scaf_50279-0.18MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Bpl_scaf_50279-0.2BONUS, ISOFORM C-RELATED
Bpl_scaf_50279-2.10CGI-41 METHYLTRANSFERASE
Bpl_scaf_50280-0.3TWO PORE CALCIUM CHANNEL PROTEIN 2
Bpl_scaf_50280-0.4UNCHARACTERIZED
Bpl_scaf_50282-0.11
Bpl_scaf_50282-0.18UNNAMED PRODUCT
Bpl_scaf_50282-0.9NAD DEPENDENT EPIMERASE/DEHYDRATASE
Bpl_scaf_50283-0.7LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
Bpl_scaf_50283-0.8LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
Bpl_scaf_50283-1.10
Bpl_scaf_50283-1.11REGULATOR OF CHROMOSOME CONDENSATION
Bpl_scaf_50283-1.16
Bpl_scaf_50283-1.18
Bpl_scaf_50283-1.19APRATAXIN-RELATED
Bpl_scaf_50283-2.0
Bpl_scaf_50283-2.12NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_50283-2.13NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_50283-2.14
Bpl_scaf_50283-2.20NEUROTRANSMITTER GATED ION CHANNEL
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