About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_49563-0.0
Bpl_scaf_49565-2.0TRANSFERASE, PUTATIVE-RELATED
Bpl_scaf_49565-2.1TRANSFERASE, PUTATIVE-RELATED
Bpl_scaf_49565-3.11LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_49565-3.5LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Bpl_scaf_49565-3.8LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Bpl_scaf_49565-3.9LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Bpl_scaf_49566-0.3
Bpl_scaf_49566-0.5
Bpl_scaf_49568-0.7NARDILYSIN
Bpl_scaf_49569-0.0
Bpl_scaf_49569-0.4UNCHARACTERIZED
Bpl_scaf_49570-0.5
Bpl_scaf_49574-0.0
Bpl_scaf_49574-0.4
Bpl_scaf_49575-0.0
Bpl_scaf_49576-0.2E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Bpl_scaf_49576-0.23UNCHARACTERIZED
Bpl_scaf_49576-0.3
Bpl_scaf_49576-0.6BCDNA.GH03377
Bpl_scaf_49576-1.8ARGINYL-TRNA SYNTHETASE
Bpl_scaf_49576-2.3CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_49576-3.12
Bpl_scaf_49576-3.2
Bpl_scaf_49576-3.4
Bpl_scaf_49584-0.5EXPRESSED PROTEIN
Bpl_scaf_49584-0.6
Bpl_scaf_49595-0.7
Bpl_scaf_4961-0.1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_49620-0.0THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Bpl_scaf_49620-0.1
Bpl_scaf_49642-0.5
Bpl_scaf_49648-0.2G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_49657-0.4ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_49657-0.7
Bpl_scaf_49667-0.3
Bpl_scaf_49677-0.11APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_49677-0.12
Bpl_scaf_49677-0.7APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_49687-0.1
Bpl_scaf_49687-0.10ZGC:195170
Bpl_scaf_49696-0.2
Bpl_scaf_49696-0.9DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_49702-0.4CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10
Bpl_scaf_49715-0.19
Bpl_scaf_49715-0.57,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Bpl_scaf_49715-0.8PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED
Bpl_scaf_49738-0.3ACTIVATOR OF BASAL TRANSCRIPTION 1
Bpl_scaf_49745-0.3
Bpl_scaf_49750-0.10SI:DKEY-31G6.6
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