About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_49408-0.4
Bpl_scaf_49408-1.10CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_49418-0.0
Bpl_scaf_49421-0.1
Bpl_scaf_49424-0.1
Bpl_scaf_49424-0.2ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_49424-0.4
Bpl_scaf_49424-1.4
Bpl_scaf_49428-0.2
Bpl_scaf_49435-1.17GUANINE NUCLEOTIDE EXCHANGE C9ORF72
Bpl_scaf_49435-1.25PIKACHURIN-LIKE PROTEIN
Bpl_scaf_49435-1.26PIKACHURIN-LIKE PROTEIN
Bpl_scaf_49435-1.28PBS LYASE HEAT-LIKE PROTEIN
Bpl_scaf_4945-0.6
Bpl_scaf_4945-0.7
Bpl_scaf_49451-0.2
Bpl_scaf_49451-1.3LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_49451-1.4HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Bpl_scaf_49451-1.839S RIBOSOMAL PROTEIN L14, MITOCHONDRIAL
Bpl_scaf_49456-0.0
Bpl_scaf_49459-0.0
Bpl_scaf_4946-0.2
Bpl_scaf_4946-1.0
Bpl_scaf_4946-2.1
Bpl_scaf_4946-3.0
Bpl_scaf_4946-3.20
Bpl_scaf_49461-0.2
Bpl_scaf_49461-0.6SI:CH211-262H13.3-RELATED-RELATED
Bpl_scaf_49461-2.0
Bpl_scaf_49462-0.1UNNAMED PRODUCT
Bpl_scaf_49462-0.2
Bpl_scaf_49462-0.3UNNAMED PRODUCT
Bpl_scaf_49462-0.4
Bpl_scaf_49462-0.42UNNAMED PRODUCT
Bpl_scaf_49462-0.6UNNAMED PRODUCT
Bpl_scaf_49462-0.7UNNAMED PRODUCT
Bpl_scaf_49462-0.9UNNAMED PRODUCT
Bpl_scaf_49462-1.3BONUS, ISOFORM C-RELATED
Bpl_scaf_49462-1.5POTASSIUM CHANNEL, SUBFAMILY K
Bpl_scaf_49462-1.7BONUS, ISOFORM C-RELATED
Bpl_scaf_49462-2.11
Bpl_scaf_49462-2.12
Bpl_scaf_49462-3.23
Bpl_scaf_49462-3.4
Bpl_scaf_49462-4.5SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Bpl_scaf_49462-5.9
Bpl_scaf_49462-6.11CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_49462-6.13DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_49462-6.4GUANYLYL CYCLASE
Bpl_scaf_49462-7.10PROTEIN DISULFIDE ISOMERASE
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