About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_49279-0.1
Bpl_scaf_49279-0.12
Bpl_scaf_49279-0.2LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_49279-0.9
Bpl_scaf_49279-1.10MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_49279-1.11
Bpl_scaf_49279-1.12
Bpl_scaf_49279-1.9C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
Bpl_scaf_49279-2.2TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Bpl_scaf_49279-4.7MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_49279-5.10MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_49279-5.9MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_49279-6.17MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_49279-6.18MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_49279-6.19
Bpl_scaf_49286-0.5NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_49286-0.7ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_49286-0.8ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_49286-0.9ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_49296-0.10ACETYL-COA HYDROLASE-RELATED
Bpl_scaf_4930-0.32OXIDASE/PEROXIDASE
Bpl_scaf_4930-0.33ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Bpl_scaf_4930-1.6
Bpl_scaf_4930-2.11
Bpl_scaf_4930-2.7SRR1-LIKE PROTEIN
Bpl_scaf_4930-2.8BETA-GLUCURONIDASE
Bpl_scaf_4930-3.0FUSELESS, ISOFORM A
Bpl_scaf_4930-3.11VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_4930-3.12
Bpl_scaf_4930-3.13
Bpl_scaf_4930-3.3
Bpl_scaf_49302-0.0ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1
Bpl_scaf_49302-0.8
Bpl_scaf_49303-0.0EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Bpl_scaf_49303-0.8L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_49303-1.0UNCHARACTERIZED
Bpl_scaf_49303-1.5PERIOSTIN-RELATED
Bpl_scaf_49303-2.2ARGINYL-TRNA SYNTHETASE
Bpl_scaf_49303-2.8
Bpl_scaf_49303-3.10
Bpl_scaf_49303-3.16B-LYMPHOCYTE ANTIGEN-RELATED
Bpl_scaf_49303-3.6ARGINYL-TRNA SYNTHETASE
Bpl_scaf_49303-4.5ANKYRIN REPEAT PROTEIN
Bpl_scaf_49303-5.11MOLTING PROTEIN MLT-4
Bpl_scaf_49303-5.9POTE ANKYRIN DOMAIN
Bpl_scaf_49303-6.2
Bpl_scaf_49303-6.5SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_49303-6.8
Bpl_scaf_49304-0.11DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
Bpl_scaf_49304-0.7
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