About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_49757-0.7
Bpl_scaf_49759-0.0
Bpl_scaf_49759-0.1
Bpl_scaf_49759-0.17
Bpl_scaf_49759-0.18
Bpl_scaf_49759-0.2
Bpl_scaf_49759-10.4LD33695P
Bpl_scaf_49759-10.5PRE-MRNA SPLICING FACTOR
Bpl_scaf_49759-11.15
Bpl_scaf_49759-11.16BONUS, ISOFORM C-RELATED
Bpl_scaf_49759-11.6BONUS, ISOFORM C-RELATED
Bpl_scaf_49759-11.7BONUS, ISOFORM C-RELATED
Bpl_scaf_49759-11.8BONUS, ISOFORM C-RELATED
Bpl_scaf_49759-11.9BONUS, ISOFORM C-RELATED
Bpl_scaf_49759-12.16
Bpl_scaf_49759-12.830S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR
Bpl_scaf_49759-12.9CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Bpl_scaf_49759-13.0
Bpl_scaf_49759-13.12LUNG SEVEN TRANSMEMBRANE RECEPTOR
Bpl_scaf_49759-2.10RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN
Bpl_scaf_49759-2.11
Bpl_scaf_49759-3.11
Bpl_scaf_49759-3.4TORSIN-1A-INTERACTING PROTEIN
Bpl_scaf_49759-4.8WD-REPEAT PROTEIN BING4
Bpl_scaf_49759-4.9VALYL-TRNA SYNTHETASES
Bpl_scaf_49759-5.10FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_49759-5.49CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1
Bpl_scaf_49759-5.5HEME-BINDING PROTEIN-RELATED
Bpl_scaf_49759-5.9HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_49759-6.27
Bpl_scaf_49759-6.29HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_49759-6.3DIVALENT CATION TOLERANCE CUTA-RELATED
Bpl_scaf_49759-9.6TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_49759-9.7
Bpl_scaf_49769-0.1
Bpl_scaf_49779-0.2TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Bpl_scaf_4979-0.0
Bpl_scaf_49802-0.0
Bpl_scaf_49802-0.10AGAP001331-PA-RELATED
Bpl_scaf_49802-0.2
Bpl_scaf_49802-0.4
Bpl_scaf_49802-0.5
Bpl_scaf_49802-0.7
Bpl_scaf_49802-0.9
Bpl_scaf_49811-0.2
Bpl_scaf_49811-0.27ROLLING PEBBLES, ISOFORM B
Bpl_scaf_49811-0.4POTE ANKYRIN DOMAIN
Bpl_scaf_49812-0.10METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_49812-0.4
Bpl_scaf_49812-0.6
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