About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_506-0.2
Bpl_scaf_50612-0.5
Bpl_scaf_50612-0.6
Bpl_scaf_50627-0.0
Bpl_scaf_50627-0.8
Bpl_scaf_50640-0.0F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
Bpl_scaf_50640-0.10APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_50640-0.11FCH AND DOUBLE SH3 DOMAINS PROTEIN
Bpl_scaf_50640-0.9GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_50649-0.34PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_50649-0.4ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_50649-0.5ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_50649-0.8BLR6086 PROTEIN
Bpl_scaf_50649-0.9BLR6086 PROTEIN
Bpl_scaf_50660-0.2
Bpl_scaf_50665-0.4GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_50675-0.6HISTONE H1
Bpl_scaf_50682-0.1
Bpl_scaf_50682-0.11ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_50682-0.2
Bpl_scaf_50682-0.3
Bpl_scaf_50682-0.9CARBOHYDRATE SULFOTRANSFERASE 15
Bpl_scaf_50690-0.20SIDESTEP PROTEIN
Bpl_scaf_50690-0.21SIDESTEP PROTEIN
Bpl_scaf_50690-0.23
Bpl_scaf_50690-0.7
Bpl_scaf_50693-0.26DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
Bpl_scaf_50693-0.34BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_50719-0.16NG37
Bpl_scaf_50719-0.18
Bpl_scaf_50719-0.19NG37
Bpl_scaf_50724-0.12
Bpl_scaf_50724-0.19PERFORIN-LIKE PROTEIN 1
Bpl_scaf_50724-0.20ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_50724-0.41ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_50724-0.8ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_5074-0.15PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_5074-0.25PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_50747-0.14GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_50747-0.23
Bpl_scaf_50747-0.3GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_50747-0.5
Bpl_scaf_50748-0.15
Bpl_scaf_50748-0.16
Bpl_scaf_50748-0.18INHIBITOR OF APOPTOSIS
Bpl_scaf_50748-0.20INHIBITOR OF APOPTOSIS
Bpl_scaf_50748-0.24
Bpl_scaf_50748-0.9
Bpl_scaf_50756-0.8FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN
Bpl_scaf_50757-0.0
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