About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_51690-0.19MALIC ENZYME-RELATED
Bpl_scaf_51690-0.20TRANSLATION ELONGATION FACTOR-RELATED
Bpl_scaf_51690-0.21
Bpl_scaf_51690-1.12CUE DOMAIN CONTAINING 2
Bpl_scaf_51690-1.14ZINC FINGER PROTEIN ZIC AND GLI
Bpl_scaf_51690-1.22MEIOSIS-SPECIFIC PROTEIN MEI4
Bpl_scaf_51690-1.2330S/40S RIBOSOMAL PROTEIN S4
Bpl_scaf_51690-2.6
Bpl_scaf_51690-2.9PRE-MRNA-PROCESSING FACTOR 17
Bpl_scaf_51690-3.1
Bpl_scaf_51690-3.7WASP-1
Bpl_scaf_51690-3.9WASP-1
Bpl_scaf_51690-4.17
Bpl_scaf_51690-4.8MALIC ENZYME-RELATED
Bpl_scaf_51690-4.9LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN
Bpl_scaf_51715-0.2
Bpl_scaf_51715-0.8CATION-TRANSPORTING ATPASE-RELATED
Bpl_scaf_5176-0.0
Bpl_scaf_5176-0.1
Bpl_scaf_51761-0.5
Bpl_scaf_51761-0.7POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_51772-0.4
Bpl_scaf_51780-0.15
Bpl_scaf_51780-0.2
Bpl_scaf_51780-0.3UNNAMED PRODUCT
Bpl_scaf_51780-0.6
Bpl_scaf_51780-0.8UNNAMED PRODUCT
Bpl_scaf_51814-0.6TETRATRICOPEPTIDE REPEAT PROTEIN 14
Bpl_scaf_51828-0.3
Bpl_scaf_51841-0.0
Bpl_scaf_51841-0.6
Bpl_scaf_51853-0.1
Bpl_scaf_51853-0.10AMMONIUM TRANSPORTER
Bpl_scaf_51872-0.5SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Bpl_scaf_51881-0.1
Bpl_scaf_51881-0.3SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_51881-0.7
Bpl_scaf_51882-1.10TOLL-LIKE RECEPTOR
Bpl_scaf_51882-1.14
Bpl_scaf_51882-1.8TOLL-LIKE RECEPTOR
Bpl_scaf_51882-1.9TOLL-LIKE RECEPTOR
Bpl_scaf_51882-2.10IP19862P
Bpl_scaf_51882-2.15OVOCHYMASE-RELATED
Bpl_scaf_51882-2.17
Bpl_scaf_51882-2.8PEPTIDOGLYCAN RECOGNITION PROTEIN
Bpl_scaf_51882-3.5FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
Bpl_scaf_51882-4.12-
Bpl_scaf_51882-4.5ZINC FINGER AND SCAN DOMAIN-CONTAINING
Bpl_scaf_51882-4.6FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Bpl_scaf_51882-5.15CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED
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