About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_52286-1.16
Bpl_scaf_52286-1.17CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_52286-1.18
Bpl_scaf_52286-2.16
Bpl_scaf_52286-2.17
Bpl_scaf_52286-2.22
Bpl_scaf_52286-2.25
Bpl_scaf_52286-2.26
Bpl_scaf_52286-2.29
Bpl_scaf_52286-2.30CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_52295-0.4
Bpl_scaf_52295-1.1
Bpl_scaf_52295-1.2
Bpl_scaf_52295-1.7
Bpl_scaf_52295-2.6
Bpl_scaf_52297-0.0
Bpl_scaf_52302-0.3GLUTAMINASE
Bpl_scaf_52304-0.5-
Bpl_scaf_52304-0.6PID DOMAIN-CONTAINING PROTEIN
Bpl_scaf_52304-1.14FILAMIN/GPBP-INTERACTING PROTEIN
Bpl_scaf_52304-1.6
Bpl_scaf_52304-1.7
Bpl_scaf_52304-2.0
Bpl_scaf_52304-2.11METABOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_52304-2.12DNAJ HOMOLOG SUBFAMILY B MEMBER 9
Bpl_scaf_52304-2.13TUDOR DOMAIN CONTAINING PROTEIN
Bpl_scaf_52304-2.22
Bpl_scaf_52304-2.23CEREBLON
Bpl_scaf_52304-2.25
Bpl_scaf_52307-0.2
Bpl_scaf_52311-0.1INHIBITOR OF APOPTOSIS
Bpl_scaf_52314-1.0
Bpl_scaf_52314-1.16SNF2/RAD54 FAMILY MEMBER
Bpl_scaf_52314-1.17BETA-LACTAMASE-RELATED
Bpl_scaf_52314-1.18TETHER CONTAINING UBX DOMAIN FOR GLUT4
Bpl_scaf_52314-2.10CASPASE
Bpl_scaf_52314-2.22SPERIOLIN-BINDING FACTOR
Bpl_scaf_52314-2.23
Bpl_scaf_52314-2.9SPERIOLIN-BINDING FACTOR
Bpl_scaf_52314-3.16UNCHARACTERIZED
Bpl_scaf_52314-3.18TRANSCRIPTION INITIATION FACTOR IA RRN3
Bpl_scaf_52314-3.22COILIN P80
Bpl_scaf_52314-3.2360S RIBOSOMAL PROTEIN L38
Bpl_scaf_5232-0.15
Bpl_scaf_5232-0.18PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_5232-0.20
Bpl_scaf_52344-0.1SMALL INTEGRAL MEMBRANE PROTEIN 8
Bpl_scaf_52344-0.5C10ORF188 FAMILY MEMBER
Bpl_scaf_52344-2.19
Bpl_scaf_52344-2.20
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