About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_53108-6.27PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
Bpl_scaf_53108-6.9
Bpl_scaf_5311-0.0
Bpl_scaf_5311-0.11
Bpl_scaf_5311-0.12
Bpl_scaf_5311-0.24
Bpl_scaf_5311-0.26
Bpl_scaf_5311-0.4
Bpl_scaf_5311-0.5
Bpl_scaf_5311-0.7
Bpl_scaf_5311-0.9
Bpl_scaf_53111-0.0FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER
Bpl_scaf_53115-0.1
Bpl_scaf_53117-0.2AGAP001331-PA-RELATED
Bpl_scaf_53117-1.0
Bpl_scaf_53117-1.2
Bpl_scaf_53117-2.13REGULATOR OF G-PROTEIN SIGNALING 3
Bpl_scaf_53117-2.17REGULATOR OF G-PROTEIN SIGNALING 3
Bpl_scaf_53117-2.18
Bpl_scaf_53117-3.6
Bpl_scaf_53117-3.8HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_53117-3.9
Bpl_scaf_53122-0.0
Bpl_scaf_53125-0.3SOLUTE CARRIER FAMILY 17
Bpl_scaf_53126-0.1
Bpl_scaf_53127-0.0G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_53127-1.0NEUROPEPTIDE Y RECEPTOR
Bpl_scaf_53127-1.3SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_53127-1.4
Bpl_scaf_53127-2.17
Bpl_scaf_53127-2.21CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED
Bpl_scaf_53127-2.24AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Bpl_scaf_53127-3.10SYMPLEKIN-RELATED
Bpl_scaf_53127-3.11CALCIUM BINDING PROTEIN
Bpl_scaf_53127-3.46NETRIN RECEPTOR UNC5
Bpl_scaf_53131-0.0ZINC FINGER PROTEIN 200
Bpl_scaf_53134-0.5
Bpl_scaf_53137-0.0
Bpl_scaf_53138-1.55'-NUCLEOTIDASE DOMAIN-CONTAINING
Bpl_scaf_53138-2.12
Bpl_scaf_53138-2.13GOLGI-ASSOCIATED PROTEIN GCP360-RELATED
Bpl_scaf_53138-2.14CENTROSOMAL PROTEIN 2
Bpl_scaf_53138-2.15CENTROSOMAL PROTEIN 2
Bpl_scaf_53138-3.19
Bpl_scaf_53138-3.5
Bpl_scaf_53138-3.7MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Bpl_scaf_53139-0.5
Bpl_scaf_53139-0.8
Bpl_scaf_53141-0.4
Bpl_scaf_53142-0.2
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