About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_53615-1.27
Bpl_scaf_53615-1.28
Bpl_scaf_53615-1.29
Bpl_scaf_53615-1.32
Bpl_scaf_53615-1.34
Bpl_scaf_53615-1.35
Bpl_scaf_53615-1.36
Bpl_scaf_53615-1.37
Bpl_scaf_53626-0.0SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_53626-1.0HEME-BINDING MONOOXYGENASE FAMILY
Bpl_scaf_53626-1.1
Bpl_scaf_53626-1.10ANAPHASE-PROMOTING COMPLEX SUBUNIT CDC26
Bpl_scaf_53631-0.0
Bpl_scaf_53639-0.3
Bpl_scaf_53639-0.5DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_53639-0.6ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_53639-1.1
Bpl_scaf_53639-1.10PROTEIN, PUTATIVE-RELATED
Bpl_scaf_53639-1.11PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_53639-1.12
Bpl_scaf_53639-2.0
Bpl_scaf_53639-2.7ARYLSULFATASE
Bpl_scaf_53640-0.5
Bpl_scaf_53641-0.2UNCHARACTERIZED
Bpl_scaf_53648-0.6
Bpl_scaf_53648-1.0CENTROMERE PROTEIN E
Bpl_scaf_53648-1.7CENTROMERE PROTEIN E
Bpl_scaf_53648-2.10TECTONIC FAMILY MEMBER
Bpl_scaf_53648-2.11APOPTOSIS INHIBITOR 5-RELATED
Bpl_scaf_53648-2.17
Bpl_scaf_53648-2.9REGULATOR OF CHROMOSOME CONDENSATION
Bpl_scaf_53649-1.5
Bpl_scaf_53649-2.12
Bpl_scaf_53649-2.13
Bpl_scaf_53649-2.15
Bpl_scaf_53649-2.2STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6
Bpl_scaf_53649-2.3
Bpl_scaf_53652-0.3ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_53657-0.3SULFOTRANSFERASE SULT
Bpl_scaf_53657-0.5OS06G0237300 PROTEIN
Bpl_scaf_53657-1.5DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_53657-2.12
Bpl_scaf_53657-2.13INHIBITOR OF APOPTOSIS
Bpl_scaf_53657-2.17
Bpl_scaf_53657-2.5PROTEIN CBG23764
Bpl_scaf_53666-0.3INHIBITOR OF APOPTOSIS
Bpl_scaf_53667-0.3
Bpl_scaf_53668-1.10
Bpl_scaf_53668-1.22
Bpl_scaf_53668-1.6
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