About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_53668-2.12SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_53668-2.3SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_53668-2.4
Bpl_scaf_53668-2.6
Bpl_scaf_53678-0.7CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
Bpl_scaf_53678-0.9
Bpl_scaf_53678-1.4SEC24-RELATED PROTEIN
Bpl_scaf_53678-2.10INOSITOL POLYPHOSPHATE KINASE
Bpl_scaf_53678-2.16MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1
Bpl_scaf_53678-2.17MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1
Bpl_scaf_53678-2.18SYNAPTOGYRIN
Bpl_scaf_53678-2.19UNCHARACTERIZED
Bpl_scaf_53679-0.0CUBILIN-LIKE PROTEIN
Bpl_scaf_53685-0.11AP-5 COMPLEX SUBUNIT MU-1
Bpl_scaf_53685-0.12UNCHARACTERIZED
Bpl_scaf_53685-0.20
Bpl_scaf_53685-0.23
Bpl_scaf_53685-0.24
Bpl_scaf_53685-0.8EXPRESSED PROTEIN
Bpl_scaf_53685-1.4PHD FINGER PROTEIN
Bpl_scaf_53685-1.5SUPEROXIDE DISMUTASE CU-ZN -RELATED
Bpl_scaf_53685-1.9
Bpl_scaf_53685-2.21MALE-ENHANCED ANTIGEN-1
Bpl_scaf_53685-2.28UNCHARACTERIZED
Bpl_scaf_53685-2.29LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Bpl_scaf_53685-2.30UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
Bpl_scaf_53685-2.39ZINC FINGER PROTEIN
Bpl_scaf_53685-2.44
Bpl_scaf_53685-2.45MITOCHONDRIAL RIBOSOMAL PROTEIN L48
Bpl_scaf_53686-0.0
Bpl_scaf_53686-0.1
Bpl_scaf_53689-0.0
Bpl_scaf_53690-0.2
Bpl_scaf_53693-0.11KREMEN PROTEIN
Bpl_scaf_53693-1.17ANKYRIN REPEAT-CONTAINING
Bpl_scaf_53693-1.19KREMEN PROTEIN
Bpl_scaf_53693-1.21
Bpl_scaf_53693-2.12SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_53693-2.6
Bpl_scaf_53693-3.3
Bpl_scaf_53693-3.30ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_53693-3.7KREMEN PROTEIN
Bpl_scaf_5370-0.0
Bpl_scaf_5370-0.14FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_5370-0.3
Bpl_scaf_5370-0.4
Bpl_scaf_5370-0.6
Bpl_scaf_5370-0.9
Bpl_scaf_53771-0.1UNCHARACTERIZED
Bpl_scaf_53771-0.7
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