About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_54046-5.17MALATE DEHYDROGENASE
Bpl_scaf_54046-5.20
Bpl_scaf_54046-5.36
Bpl_scaf_54046-5.37
Bpl_scaf_54046-5.39
Bpl_scaf_54046-5.7
Bpl_scaf_54046-5.8LD33804P
Bpl_scaf_54051-0.0
Bpl_scaf_54051-0.14
Bpl_scaf_54051-0.17LEUCYL-TRNA SYNTHETASE
Bpl_scaf_54065-0.2
Bpl_scaf_54073-0.11LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_54073-0.12
Bpl_scaf_54083-0.3-
Bpl_scaf_54083-0.7
Bpl_scaf_54088-0.0TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_54088-0.14TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_54088-0.15TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_54088-0.16TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_54088-0.2
Bpl_scaf_54097-0.3
Bpl_scaf_54097-0.5HL01030P-RELATED
Bpl_scaf_54107-0.13CEREBELLIN-RELATED
Bpl_scaf_54107-0.19CEREBELLIN-RELATED
Bpl_scaf_54107-0.36CEREBELLIN-RELATED
Bpl_scaf_54107-0.37CEREBELLIN-RELATED
Bpl_scaf_54111-0.11NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
Bpl_scaf_54111-0.18INTERFERON-INDUCED PROTEIN 44
Bpl_scaf_54111-0.9
Bpl_scaf_54118-0.0WSCD FAMILY MEMBER CG9164
Bpl_scaf_54118-0.1
Bpl_scaf_54118-0.6
Bpl_scaf_54119-0.5
Bpl_scaf_54119-0.8
Bpl_scaf_54119-1.12MYB-BINDING PROTEIN 1A FAMILY MEMBER
Bpl_scaf_54119-1.13SOLUTE CARRIER FAMILY 13 MEMBER
Bpl_scaf_54119-1.18
Bpl_scaf_54119-2.12OXYSTEROL-BINDING PROTEIN-RELATED
Bpl_scaf_54119-2.4OXYSTEROL-BINDING PROTEIN-RELATED
Bpl_scaf_54119-3.6NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR
Bpl_scaf_54119-4.4SEPTIN
Bpl_scaf_54119-5.6SEPTIN
Bpl_scaf_54119-6.15SARM1
Bpl_scaf_54119-6.17B9 DOMAIN-CONTAINING
Bpl_scaf_54119-6.18DIMETHYLANILINE MONOOXYGENASE
Bpl_scaf_54119-6.44DIMETHYLANILINE MONOOXYGENASE
Bpl_scaf_54121-0.0RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_54121-0.5BAND 7 PROTEIN-RELATED
Bpl_scaf_54128-0.12
Bpl_scaf_54128-0.2
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