About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_54128-0.9UNCHARACTERIZED
Bpl_scaf_54129-0.13CBP/P300-RELATED
Bpl_scaf_54129-0.14SI:DKEY-31G6.6
Bpl_scaf_54129-0.15
Bpl_scaf_54129-1.0PHD FINGER PROTEIN
Bpl_scaf_54129-2.14
Bpl_scaf_54129-2.20DUF4605 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_54129-2.21ANNEXIN
Bpl_scaf_54129-2.22
Bpl_scaf_54129-2.3PHD FINGER PROTEIN
Bpl_scaf_54129-2.9
Bpl_scaf_54129-3.18PHD FINGER PROTEIN
Bpl_scaf_54129-3.20
Bpl_scaf_54129-3.23
Bpl_scaf_54129-3.4
Bpl_scaf_54129-3.7
Bpl_scaf_54129-3.8
Bpl_scaf_54129-4.0
Bpl_scaf_54129-4.3
Bpl_scaf_54129-5.15TNF RECEPTOR ASSOCIATED FACTOR
Bpl_scaf_54129-5.17ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Bpl_scaf_54129-5.18D-ERYTHRULOSE REDUCTASE
Bpl_scaf_54129-5.19UNCHARACTERIZED
Bpl_scaf_54129-5.32PROTEIN FAM220A
Bpl_scaf_54129-6.8TRANSDUCIN BETA-LIKE 3
Bpl_scaf_54145-0.11DNA-BINDING PROTEIN SATB FAMILY MEMBER
Bpl_scaf_54145-0.4TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
Bpl_scaf_54160-0.0
Bpl_scaf_54160-0.1
Bpl_scaf_54160-0.3
Bpl_scaf_54160-0.5LD39211P
Bpl_scaf_54160-0.6GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_54174-0.1
Bpl_scaf_54174-0.8POTASSIUM CHANNEL, SUBFAMILY K
Bpl_scaf_54175-0.7LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_54175-1.6PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Bpl_scaf_54175-1.7TRANSCRIPTION FACTOR CP2
Bpl_scaf_54175-2.11HMG DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_54175-2.18
Bpl_scaf_54175-2.9RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_54175-4.5GH04942P
Bpl_scaf_54175-5.10ATP-DEPENDENT RNA AND DNA HELICASE
Bpl_scaf_54175-5.5T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Bpl_scaf_54175-5.8
Bpl_scaf_54175-5.9ANTERIOR GRADIENT PROTEIN-RELATED
Bpl_scaf_54175-6.18PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
Bpl_scaf_54175-6.19ANION EXCHANGE PROTEIN
Bpl_scaf_54175-6.20
Bpl_scaf_54179-0.11HOMEOBOX PROTEIN ABDOMINAL-B
Bpl_scaf_54193-0.16V-TYPE PROTON ATPASE SUBUNIT B
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