About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_5462-1.26
Bpl_scaf_5462-1.27
Bpl_scaf_54620-0.0
Bpl_scaf_54620-0.24
Bpl_scaf_54620-0.25MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_54620-0.26
Bpl_scaf_54620-0.27MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_54620-0.28RIBOFLAVIN TRANSPORTER RIBJ
Bpl_scaf_54628-0.13
Bpl_scaf_54628-0.19MACROGLOBULIN / COMPLEMENT
Bpl_scaf_54628-0.20MACROGLOBULIN / COMPLEMENT
Bpl_scaf_54629-0.3
Bpl_scaf_54629-0.4
Bpl_scaf_54629-1.7UNCHARACTERIZED
Bpl_scaf_54629-1.8
Bpl_scaf_54629-1.9
Bpl_scaf_54629-2.11SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO
Bpl_scaf_54629-2.12SINGLE-PASS MEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_54629-2.18COMM DOMAIN CONTAINING PROTEIN 2
Bpl_scaf_54629-2.9ALMS1-RELATED
Bpl_scaf_54629-3.17SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20
Bpl_scaf_54629-3.18
Bpl_scaf_54629-3.21
Bpl_scaf_54629-4.12
Bpl_scaf_54629-4.26DIAMINE N-ACETYLTRANSFERASE
Bpl_scaf_54629-4.3DIAMINE N-ACETYLTRANSFERASE
Bpl_scaf_54629-4.8G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_54629-5.11CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_54629-5.13
Bpl_scaf_54629-5.20ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_54629-5.22
Bpl_scaf_54629-5.8ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_54629-5.9PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
Bpl_scaf_54634-0.2BONUS, ISOFORM C-RELATED
Bpl_scaf_54650-0.17
Bpl_scaf_54650-0.18
Bpl_scaf_54650-0.19
Bpl_scaf_54650-0.20
Bpl_scaf_54651-0.2
Bpl_scaf_54651-0.5COLLAGEN ALPHA
Bpl_scaf_54651-0.6UNCHARACTERIZED
Bpl_scaf_54651-1.4PUTATIVE-RELATED
Bpl_scaf_54651-1.8
Bpl_scaf_54651-3.0
Bpl_scaf_54651-4.3CYCLINS
Bpl_scaf_54651-4.5INHIBITOR OF APOPTOSIS
Bpl_scaf_54651-4.6CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
Bpl_scaf_54651-5.11CALPONIN
Bpl_scaf_54651-5.15INHIBITOR OF APOPTOSIS
Bpl_scaf_54651-5.17CALPONIN
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