About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 1 2 3 4 5 6 7 8 9 10 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g10178
Clavulariidae_g10179
Clavulariidae_g1018INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10180
Clavulariidae_g10181
Clavulariidae_g10182PROTEIN CBG26694
Clavulariidae_g10183ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10184
Clavulariidae_g10185FLAP ENDONUCLEASE FAMILY MEMBER
Clavulariidae_g10186
Clavulariidae_g10187CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10188
Clavulariidae_g10189RETROTRANSPOSON
Clavulariidae_g1019CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10190CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10191REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10192ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10193
Clavulariidae_g10194
Clavulariidae_g10195PROTEIN CBG26694
Clavulariidae_g10196
Clavulariidae_g10197
Clavulariidae_g10198DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g10199PROTEIN CBG26694
Clavulariidae_g102MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
Clavulariidae_g1020DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g10200REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10201
Clavulariidae_g10202-
Clavulariidae_g10203
Clavulariidae_g10204C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10205
Clavulariidae_g10206
Clavulariidae_g10207
Clavulariidae_g10208
Clavulariidae_g10209ATP-DEPENDENT DNA HELICASE
Clavulariidae_g1021
Clavulariidae_g10210ATP-DEPENDENT DNA HELICASE
Clavulariidae_g10211DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10212DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10213
Clavulariidae_g10214REVERSE TRANSCRIPTASES
Clavulariidae_g10215DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g10216FLAP ENDONUCLEASE FAMILY MEMBER
Clavulariidae_g10217
Clavulariidae_g10218
Clavulariidae_g10219
Clavulariidae_g1022REVERSE TRANSCRIPTASES
Clavulariidae_g10220
Clavulariidae_g10221
TOP