About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 1 2 3 4 5 6 7 8 9 10 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g10042
Clavulariidae_g10043RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10044RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10045
Clavulariidae_g10046SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g10047
Clavulariidae_g10048
Clavulariidae_g10049RETROTRANSPOSON
Clavulariidae_g1005
Clavulariidae_g10050RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10051
Clavulariidae_g10052PROTEIN CBG23806
Clavulariidae_g10053
Clavulariidae_g10054INHIBITOR OF GROWTH PROTEIN
Clavulariidae_g10055
Clavulariidae_g10056PX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10057
Clavulariidae_g10058EXPRESSED PROTEIN
Clavulariidae_g10059
Clavulariidae_g1006ATP-DEPENDENT DNA HELICASE
Clavulariidae_g10060
Clavulariidae_g10061
Clavulariidae_g10062
Clavulariidae_g10063ATP-DEPENDENT DNA HELICASE
Clavulariidae_g10064
Clavulariidae_g10065PROTEIN, PUTATIVE-RELATED
Clavulariidae_g10066
Clavulariidae_g10067EXPRESSED PROTEIN
Clavulariidae_g10068
Clavulariidae_g10069
Clavulariidae_g1007CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10070REVERSE TRANSCRIPTASES
Clavulariidae_g10071-
Clavulariidae_g10072SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g10073
Clavulariidae_g10074
Clavulariidae_g10075CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10076INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10077EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
Clavulariidae_g10078CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10079EPM2A-INTERACTING PROTEIN 1
Clavulariidae_g1008RETROTRANSPOSON
Clavulariidae_g10080CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10081GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Clavulariidae_g10082TRANSPOSASE
Clavulariidae_g10083
Clavulariidae_g10084
Clavulariidae_g10085COLLAGEN ALPHA
Clavulariidae_g10086
Clavulariidae_g10087DNA HELICASE RECQ FAMILY MEMBER
TOP