About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g10088
Clavulariidae_g10089
Clavulariidae_g1009REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10090
Clavulariidae_g10091
Clavulariidae_g10092
Clavulariidae_g10093THAP DOMAIN-CONTAINING PROTEIN 6
Clavulariidae_g10094
Clavulariidae_g10095PROTEIN B, PUTATIVE-RELATED-RELATED
Clavulariidae_g10096REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10097PROTEIN CBG26694
Clavulariidae_g10098
Clavulariidae_g10099INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Clavulariidae_g101
Clavulariidae_g1010
Clavulariidae_g10100ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10101PX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10102THAP DOMAIN PROTEIN
Clavulariidae_g10103
Clavulariidae_g10104
Clavulariidae_g10105
Clavulariidae_g10106
Clavulariidae_g10107VERTNIN
Clavulariidae_g10108
Clavulariidae_g10109
Clavulariidae_g1011
Clavulariidae_g10110
Clavulariidae_g10111REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10112
Clavulariidae_g10113CXXC-TYPE ZINC FINGER PROTEIN 1
Clavulariidae_g10114
Clavulariidae_g10115
Clavulariidae_g10116
Clavulariidae_g10117
Clavulariidae_g10118
Clavulariidae_g10119
Clavulariidae_g1012EXPRESSED PROTEIN
Clavulariidae_g10120REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10121ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10122
Clavulariidae_g10123DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10124REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10125THAP DOMAIN PROTEIN
Clavulariidae_g10126ATP-DEPENDENT DNA HELICASE
Clavulariidae_g10127ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10128REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10129
Clavulariidae_g1013
Clavulariidae_g10130PX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10131HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
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