About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_022813-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
OS493_022815-T1
OS493_022816-T1ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN
OS493_022817-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
OS493_022819-T1
OS493_022820-T1SH3 MULTIPLE DOMAIN
OS493_022821-T1TESTICULAR HAPLOID EXPRESSED GENE PROTEIN
OS493_022822-T1HSPC111 PROTEIN-RELATED
OS493_022823-T1NUP107-RELATED
OS493_022824-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_022825-T1
OS493_022826-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_022827-T1
OS493_022828-T1
OS493_022829-T1
OS493_022830-T1
OS493_022831-T1
OS493_022832-T1RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
OS493_022833-T1RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
OS493_022834-T1
OS493_022835-T1S-FORMYLGLUTATHIONE HYDROLASE
OS493_022836-T1
OS493_022837-T1
OS493_022838-T1
OS493_022839-T1
OS493_022840-T1
OS493_022841-T1
OS493_022842-T1
OS493_022843-T1
OS493_022844-T1
OS493_022845-T1
OS493_022846-T1
OS493_022847-T1
OS493_022850-T1
OS493_022851-T1
OS493_022852-T1
OS493_022853-T1
OS493_022854-T1
OS493_022855-T1F20B24.22
OS493_022856-T1TRANSMEMBRANE PROTEIN 192
OS493_022857-T1PROTOPORPHYRINOGEN OXIDASE
OS493_022858-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
OS493_022859-T1RAS-LIKE FAMILY MEMBER 11
OS493_022860-T1
OS493_022861-T1CYTOKINE RECEPTOR
OS493_022862-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
OS493_022863-T1
OS493_022864-T1
OS493_022865-T1LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2
OS493_022866-T1SORTILIN RELATED
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