About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_022479-T1
OS493_022480-T1
OS493_022481-T1
OS493_022482-T1
OS493_022483-T1
OS493_022484-T1
OS493_022485-T1
OS493_022486-T1
OS493_022487-T1
OS493_022488-T1
OS493_022489-T1
OS493_022490-T1
OS493_022491-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_022492-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
OS493_022493-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
OS493_022495-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
OS493_022496-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
OS493_022497-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
OS493_022498-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_022500-T1
OS493_022501-T1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_022502-T1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_022503-T1FORKHEAD BOX PROTEIN
OS493_022504-T1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_022505-T1CELL DIVISION PROTEIN KINASE
OS493_022506-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
OS493_022507-T1
OS493_022508-T1
OS493_022509-T1COILED-COIL DOMAIN-CONTAINING 166
OS493_022510-T1IST1 FAMILY MEMBER
OS493_022511-T1SERINE-THREONINE PROTEIN KINASE
OS493_022512-T1
OS493_022514-T1
OS493_022515-T1SERINE-THREONINE PROTEIN KINASE
OS493_022516-T1
OS493_022517-T1
OS493_022518-T1
OS493_022519-T1APOPTOSIS-STIMULATING OF P53 PROTEIN
OS493_022520-T1
OS493_022521-T1APOPTOSIS-STIMULATING OF P53 PROTEIN
OS493_022522-T1PRE-MRNA SPLICING FACTOR
OS493_022523-T1PRE-MRNA SPLICING FACTOR
OS493_022524-T1PRE-MRNA SPLICING FACTOR
OS493_022525-T1PRE-MRNA SPLICING FACTOR
OS493_022527-T1APOPTOSIS-STIMULATING OF P53 PROTEIN
OS493_022528-T1
OS493_022529-T1
OS493_022530-T1FI19480P1
OS493_022531-T1SERINE-THREONINE PROTEIN KINASE
OS493_022532-T1GLUTAMINE-TRNA LIGASE
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