About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_022423-T1
OS493_022424-T1
OS493_022425-T1TITIN
OS493_022426-T1PROTEIN SIDEKICK
OS493_022427-T1TITIN
OS493_022428-T1
OS493_022429-T1
OS493_022430-T1
OS493_022431-T1
OS493_022432-T1
OS493_022433-T1
OS493_022434-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_022436-T1
OS493_022437-T1GLYCOSYLTRANSFERASE
OS493_022438-T1GLYCOSYLTRANSFERASE
OS493_022440-T1
OS493_022442-T1G-PROTEIN COUPLED RECEPTOR
OS493_022443-T1
OS493_022445-T1
OS493_022446-T11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
OS493_022447-T1
OS493_022448-T1
OS493_022450-T1
OS493_022452-T11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
OS493_022453-T1TITIN
OS493_022454-T1
OS493_022455-T1PROTEIN SIDEKICK
OS493_022456-T1VASCULAR CELL ADHESION MOLECULE 1
OS493_022457-T1MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
OS493_022458-T1
OS493_022459-T1
OS493_022460-T1
OS493_022461-T1
OS493_022462-T1
OS493_022463-T1NUCLEAR HORMONE RECEPTOR
OS493_022464-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_022465-T11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
OS493_022466-T11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
OS493_022467-T1
OS493_022468-T1
OS493_022469-T1
OS493_022470-T1
OS493_022471-T1
OS493_022472-T1
OS493_022473-T1
OS493_022474-T1EXPRESSED PROTEIN
OS493_022475-T1
OS493_022476-T1
OS493_022477-T1
OS493_022478-T1
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