About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_022594-T1
OS493_022595-T1
OS493_022596-T1TITIN
OS493_022597-T1
OS493_022598-T1
OS493_022599-T1
OS493_022600-T1
OS493_022601-T1
OS493_022602-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_022603-T1
OS493_022604-T1
OS493_022605-T1
OS493_022606-T1
OS493_022607-T1BASIGIN RELATED
OS493_022608-T1TITIN
OS493_022609-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
OS493_022610-T1
OS493_022611-T1
OS493_022612-T1
OS493_022613-T1
OS493_022614-T1
OS493_022615-T1TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN
OS493_022616-T1TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN
OS493_022617-T1RIBONUCLEASE T2
OS493_022618-T1
OS493_022619-T150S RIBOSOMAL PROTEIN L4
OS493_022620-T1RNA BINDING PROTEIN
OS493_022621-T1DNA-DIRECTED RNA POLYMERASE II, III
OS493_022622-T1
OS493_022623-T1VISUAL SYSTEM HOMEOBOX 2
OS493_022624-T1
OS493_022625-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
OS493_022626-T1
OS493_022627-T1KINESIN LIGHT CHAIN
OS493_022628-T1MENIN
OS493_022629-T1EUKARYOTIC TRANSLATION INITIATION FACTOR
OS493_022630-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
OS493_022631-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
OS493_022632-T1UPF0696 PROTEIN C11ORF68
OS493_022633-T1UPF0696 PROTEIN C11ORF68
OS493_022634-T1UPF0696 PROTEIN C11ORF68
OS493_022636-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
OS493_022637-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_022639-T1TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN
OS493_022642-T1TIGHT JUNCTION-ASSOCIATED PROTEIN 1
OS493_022643-T1INNER MEMBRANE TRANSPORT PROTEIN YAJR
OS493_022644-T1INSULINOMA-ASSOCIATED 1
OS493_022646-T11-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
OS493_022648-T1
OS493_022649-T1SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES
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