About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_022371-T1
OS493_022372-T1
OS493_022373-T1
OS493_022374-T1ZINC FINGER PROTEIN
OS493_022375-T1EXPORTIN 1/5
OS493_022376-T1
OS493_022377-T1C1ORF73 PROTEIN
OS493_022378-T1C1ORF73 PROTEIN
OS493_022379-T1C1ORF73 PROTEIN
OS493_022380-T1LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN
OS493_022381-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
OS493_022382-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
OS493_022383-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
OS493_022384-T1TRANSCRIPTIONAL REPRESSOR MPRA
OS493_022385-T1UNCHARACTERIZED
OS493_022386-T1UNCHARACTERIZED
OS493_022387-T1UNCHARACTERIZED
OS493_022388-T1METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
OS493_022389-T1
OS493_022390-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
OS493_022391-T1UNCHARACTERIZED
OS493_022392-T1
OS493_022393-T1
OS493_022394-T1
OS493_022395-T1
OS493_022396-T1KINETOCHORE-ASSOCIATED PROTEIN NSL1 HOMOLOG
OS493_022397-T1NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
OS493_022398-T1
OS493_022399-T1GLUTAREDOXIN FAMILY MEMBER
OS493_022400-T1SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2
OS493_022401-T1IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL
OS493_022402-T1
OS493_022403-T1
OS493_022404-T1TWO PORE CHANNEL 3
OS493_022405-T1
OS493_022406-T1
OS493_022407-T1
OS493_022408-T1
OS493_022409-T1
OS493_022410-T1
OS493_022411-T1
OS493_022412-T1CONTACTIN 5
OS493_022414-T1TITIN
OS493_022415-T1TITIN
OS493_022417-T1
OS493_022418-T1
OS493_022419-T1TITIN
OS493_022420-T1
OS493_022421-T1
OS493_022422-T1TITIN
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