About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 407 408 409 410 411 412 413 414 415 416 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_008937-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
OS493_008938-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
OS493_008939-T1-
OS493_008941-T15-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED
OS493_008942-T1G-PROTEIN COUPLED RECEPTOR
OS493_008943-T1FIBRILLIN-RELATED
OS493_008944-T1SYNAPTOPHYSIN
OS493_008945-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_008946-T1-
OS493_008947-T1CELL DIVISION CYCLE 16,23,27
OS493_008948-T1ARGINASE/AGMATINASE
OS493_008949-T1ARGINASE/AGMATINASE
OS493_008950-T1ALPHA-CATULIN
OS493_008951-T1-
OS493_008952-T1AGAP005574-PA
OS493_008953-T1ALPHA-CATULIN
OS493_008954-T1ALPHA-CATULIN
OS493_008955-T1VILLIN
OS493_008956-T1VILLIN
OS493_008957-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
TOP