About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_022044-T1METHYLTRANSFERASE
OS493_022046-T1
OS493_022047-T1
OS493_022048-T1
OS493_022049-T1G-PROTEIN COUPLED RECEPTOR
OS493_022052-T1
OS493_022053-T1
OS493_022054-T1
OS493_022055-T1
OS493_022056-T1
OS493_022058-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_022059-T1SI:DKEY-97L20.6
OS493_022060-T1COLD SHOCK DOMAIN CONTAINING PROTEINS
OS493_022061-T1
OS493_022063-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_022065-T1SI:DKEY-97L20.6
OS493_022066-T1SI:DKEY-97L20.6
OS493_022067-T1
OS493_022068-T1
OS493_022069-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_022070-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_022071-T1SERINE/THREONINE-PROTEIN KINASE
OS493_022072-T1SERINE/THREONINE-PROTEIN KINASE
OS493_022073-T1HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED
OS493_022074-T1SERINE/THREONINE-PROTEIN KINASE
OS493_022075-T1HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED
OS493_022077-T1
OS493_022078-T1
OS493_022079-T1
OS493_022080-T1
OS493_022081-T1
OS493_022082-T1
OS493_022083-T1
OS493_022084-T1
OS493_022085-T1TETRANECTIN-RELATED
OS493_022086-T1
OS493_022087-T1
OS493_022088-T1HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED
OS493_022089-T1
OS493_022090-T1
OS493_022091-T1
OS493_022092-T1
OS493_022093-T1
OS493_022094-T1
OS493_022095-T1
OS493_022096-T1
OS493_022097-T1
OS493_022098-T1
OS493_022099-T1
OS493_022100-T1SI:DKEY-97L20.6
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