About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_021774-T1
OS493_021775-T1UBIQUITIN-ACTIVATING ENZYME E1
OS493_021776-T1UBIQUITIN-ACTIVATING ENZYME E1
OS493_021777-T1
OS493_021778-T1
OS493_021779-T1
OS493_021781-T1
OS493_021783-T1
OS493_021784-T1
OS493_021785-T1
OS493_021786-T1
OS493_021787-T1
OS493_021788-T1
OS493_021789-T1
OS493_021790-T1TETRASPANIN
OS493_021791-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_021792-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_021794-T1PLACENTAL PROTEIN 11-RELATED
OS493_021795-T1
OS493_021796-T1INTESTINAL TREFOIL FACTOR-RELATED
OS493_021797-T1INTESTINAL TREFOIL FACTOR-RELATED
OS493_021798-T1ETS
OS493_021799-T1
OS493_021800-T1ENGULFMENT AND CELL MOTILITY
OS493_021801-T1
OS493_021802-T1UNCHARACTERIZED
OS493_021803-T1ANTHRAX TOXIN RECEPTOR
OS493_021804-T1MULTICOPPER OXIDASE-RELATED
OS493_021807-T1COLLAGEN ALPHA
OS493_021808-T1OPSIN
OS493_021810-T1SERUM RESPONSE FACTOR-BINDING
OS493_021811-T1CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
OS493_021812-T1CHOLINE/ETHANOALAMINE KINASE
OS493_021813-T1TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
OS493_021814-T1
OS493_021816-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_021817-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_021818-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_021819-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_021820-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_021821-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_021822-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_021823-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_021824-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_021825-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_021826-T1CAT EYE SYNDROME CRITICAL REGION PROTEIN 2
OS493_021827-T1UNCHARACTERIZED
OS493_021828-T1UNCHARACTERIZED
OS493_021829-T1
OS493_021830-T1HELIX LOOP HELIX PROTEIN 21-RELATED
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