About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_021886-T1
OS493_021887-T1
OS493_021888-T1
OS493_021889-T1
OS493_021890-T1
OS493_021891-T1ADHESION G-PROTEIN COUPLED RECEPTOR
OS493_021892-T1
OS493_021893-T1
OS493_021895-T1
OS493_021896-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_021897-T1
OS493_021898-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_021899-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_021900-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_021901-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_021902-T1LEUCOKININ RECEPTOR-RELATED
OS493_021903-T1LEUCOKININ RECEPTOR-RELATED
OS493_021904-T1LEUCOKININ RECEPTOR-RELATED
OS493_021905-T1FANCONI ANEMIA GROUP C PROTEIN FANCC
OS493_021906-T1BETA-AMYLOID BINDING PROTEIN-RELATED
OS493_021907-T1
OS493_021908-T1
OS493_021909-T1EIF4G DOMAIN PROTEIN
OS493_021910-T1
OS493_021911-T1COILIN
OS493_021912-T1LEUCOKININ RECEPTOR-RELATED
OS493_021913-T1
OS493_021914-T1
OS493_021915-T1MULTICOPPER OXIDASE-RELATED
OS493_021916-T1C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
OS493_021917-T1LEUCOKININ RECEPTOR-RELATED
OS493_021918-T1NADH-CYTOCHROME B5 REDUCTASE
OS493_021919-T1DYNEIN INTERMEDIATE CHAIN
OS493_021920-T1
OS493_021921-T1SLR5058 PROTEIN
OS493_021922-T1SLR5058 PROTEIN
OS493_021923-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
OS493_021925-T1PROTEIN TORNADO 1
OS493_021926-T1SLR5058 PROTEIN
OS493_021927-T1SLR5058 PROTEIN
OS493_021928-T1SLR5058 PROTEIN
OS493_021929-T1SLR5058 PROTEIN
OS493_021930-T1SLR5058 PROTEIN
OS493_021931-T1
OS493_021932-T1PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED
OS493_021933-T1
OS493_021934-T1
OS493_021936-T1DYNEIN INTERMEDIATE CHAIN
OS493_021937-T1SLR5058 PROTEIN
OS493_021938-T1SLR5058 PROTEIN
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