About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 402 403 404 405 406 407 408 409 410 411 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_008828-T1ATP-BINDING CASSETTE TRANSPORTER
OS493_008829-T1-
OS493_008830-T1-
OS493_008831-T1BLR2807 PROTEIN
OS493_008832-T1BLR2807 PROTEIN
OS493_008833-T1BLR2807 PROTEIN
OS493_008835-T1BLR2807 PROTEIN
OS493_008836-T1BLR2807 PROTEIN
OS493_008838-T1BLR2807 PROTEIN
OS493_008841-T1BLR2807 PROTEIN
OS493_008842-T1BLR2807 PROTEIN
OS493_008843-T1CAMK FAMILY PROTEIN KINASE
OS493_008844-T1SI:DKEY-276J7.1
OS493_008845-T1-
OS493_008846-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_008847-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_008848-T1TETRA THYMOSIN
OS493_008849-T1THYMOSIN BETA
OS493_008850-T1PROTEIN ABHD18
OS493_008851-T1STERILE20-LIKE KINASE, ISOFORM B-RELATED
TOP