About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_021543-T1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
OS493_021544-T1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
OS493_021545-T1
OS493_021546-T1
OS493_021547-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_021548-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_021551-T1SULFITE REDUCTASE
OS493_021552-T1SULFITE REDUCTASE
OS493_021553-T1-
OS493_021554-T1
OS493_021555-T1PLEXUS, ISOFORM A
OS493_021556-T1OXIDOREDUCTASE-RELATED
OS493_021557-T1OXIDOREDUCTASE-RELATED
OS493_021558-T1
OS493_021559-T1
OS493_021560-T1OXIDOREDUCTASE-RELATED
OS493_021561-T1DIPHTHINE SYNTHASE
OS493_021562-T130S 40S RIBOSOMAL PROTEIN
OS493_021563-T1CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
OS493_021564-T1NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED
OS493_021565-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 78
OS493_021566-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 78
OS493_021567-T1KINESIN-RELATED
OS493_021568-T1
OS493_021569-T1RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
OS493_021570-T1RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
OS493_021571-T1TRANS-SULFURATION ENZYME FAMILY MEMBER
OS493_021572-T1PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED
OS493_021573-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_021574-T1U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A
OS493_021575-T1POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
OS493_021576-T1CALCIUM BINDING PROTEIN
OS493_021578-T1
OS493_021579-T1SUSHI DOMAIN-CONTAINING PROTEIN 1
OS493_021581-T1PROTEIN SIDEKICK
OS493_021584-T1
OS493_021585-T1SUSHI DOMAIN-CONTAINING PROTEIN 1
OS493_021588-T1
OS493_021589-T1
OS493_021590-T1SUSHI DOMAIN-CONTAINING PROTEIN 1
OS493_021592-T1
OS493_021594-T1OXIDOREDUCTASE-RELATED
OS493_021595-T1
OS493_021596-T1LD33804P
OS493_021597-T1
OS493_021598-T1
OS493_021599-T1LD33804P
OS493_021600-T1KELCH PROTEIN
OS493_021601-T1LD33804P
OS493_021602-T1INTRAFLAGELLAR TRANSPORT PROTEIN 74 HOMOLOG
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