About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_022219-T1PROTEIN SHORTAGE IN CHIASMATA 1 ORTHOLOG
OS493_022220-T1
OS493_022221-T1ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT
OS493_022222-T1CYTOCHROME P450 FAMILY 4
OS493_022223-T1CYTOCHROME P450 FAMILY 4
OS493_022224-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
OS493_022225-T1
OS493_022226-T1CENTROMERE PROTEIN C
OS493_022227-T1
OS493_022228-T1
OS493_022229-T1INTRAFLAGELLAR TRANSPORT PROTEIN 25 HOMOLOG
OS493_022230-T1BTB/POZ DOMAIN-CONTAINING PROTEIN 19
OS493_022231-T1RHO GTPASE-ACTIVATING PROTEIN 100F
OS493_022232-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_022233-T1TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
OS493_022234-T1TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
OS493_022235-T1USP DOMAIN-CONTAINING PROTEIN
OS493_022236-T1ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
OS493_022237-T1
OS493_022238-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_022239-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_022240-T1
OS493_022241-T1
OS493_022242-T1
OS493_022243-T1
OS493_022244-T1
OS493_022245-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_022246-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
OS493_022247-T1
OS493_022248-T1
OS493_022249-T1
OS493_022250-T1
OS493_022251-T1
OS493_022252-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_022253-T1
OS493_022254-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_022255-T1TRIMERIC INTRACELLULAR CATION CHANNEL
OS493_022256-T1RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED
OS493_022257-T1CARBOXYLESTERASE
OS493_022258-T1CARBOXYLESTERASE
OS493_022259-T1CARBOXYLESTERASE
OS493_022260-T1LD25575P
OS493_022261-T1
OS493_022262-T1ZINC FINGER PROTEIN DZIP1
OS493_022263-T1FAS-ASSOCIATED PROTEIN
OS493_022264-T1INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
OS493_022265-T1
OS493_022266-T1FUN14 DOMAIN CONTAINING
OS493_022267-T1CX9C MOTIF-CONTAINING PROTEIN 4
OS493_022268-T1RIBOSOMAL PROTEIN L2
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