About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01801ORGANIC SOLUTE TRANSPORTER-RELATED
HS01802
HS01803PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
HS01804BUTYROPHILIN
HS01805NEUROTRANSMITTER GATED ION CHANNEL
HS01806ADHESION G-PROTEIN COUPLED RECEPTOR
HS01807ADHESION G-PROTEIN COUPLED RECEPTOR
HS01808SPERMINE SYNTHASE
HS01809B30.2/SPRY DOMAIN-CONTAINING PROTEIN
HS01810NFRKB-RELATED
HS01811EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED
HS01812GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT
HS01813BROMODOMAIN-CONTAINING PROTEIN 8
HS01814BROMODOMAIN-CONTAINING PROTEIN 8
HS01815AT29763P-RELATED
HS01816SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
HS01817ZINC FINGER-CONTAINING
HS01818T CELL-SPECIFIC ADAPTER PROTEIN TSAD
HS01819PUR-TRANSCRIPTIONAL ACTIVATOR
HS01820HEREGULIN-NEUREGULIN FAMILY MEMBER
HS01821SOLUTE CARRIER FAMILY 22 MEMBER
HS01822GLYCOGEN PHOSPHORYLASE
HS01823PIKACHURIN-LIKE PROTEIN
HS01824PECANEX
HS01825IMMUNOGLOBULIN SUPERFAMILY MEMBER 11
HS01826DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED
HS01827SEGMENT POLARITY PROTEIN DISHEVELLED
HS01828CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
HS01829HEAT SHOCK PROTEINP-12.2-RELATED
HS01830MELANOMA-DERIVED GROWTH REGULATORY PROTEIN
HS01831BICD FAMILY-LIKE CARGO ADAPTER
HS01832MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40
HS01833
HS01834GLYCOSYLTRANSFERASE
HS01835CHONDROLECTIN VARIANT CHODLFDELTAE.
HS01836SUSHI DOMAIN-CONTAINING PROTEIN
HS01837MAP/MICROTUBULE AFFINITY-REGULATING KINASE
HS01838NECTIN-RELATED
HS01839THY-1 MEMBRANE GLYCOPROTEIN
HS01840BUD13 HOMOLOG
HS01841U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
HS01842
HS01843OLIGOPHRENIN 1
HS01844TRANSIENT RECEPTOR POTENTIAL CHANNEL
HS01845FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS01846YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER
HS01847INHIBITOR OF APOPTOSIS
HS0184860S RIBOSOMAL PROTEIN L23A
HS01849ATP-DEPENDENT RNA HELICASE RHLE-RELATED
HS01850MALARIA ANTIGEN-RELATED
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