About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01851DYNEIN LIGHT CHAIN
HS01852RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
HS01853GPI TRANSAMIDASE COMPONENT PIG-S
HS01854FRUCTOSE-BISPHOSPHATE ALDOLASE
HS01855G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
HS01856CHAPERONIN
HS01857IG-LIKE DOMAIN-CONTAINING PROTEIN
HS01858PICALM INTERACTING MITOTIC REGULATOR PIMREG
HS01859MULTIDRUG RESISTANCE PROTEIN
HS01860MULTIDRUG RESISTANCE PROTEIN
HS01861NEUROSECRETORY PROTEIN VGF
HS01862
HS01863SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED
HS01864WD40 REPEAT PROTEIN
HS01865INOSITOL 5-PHOSPHATASE
HS01866PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
HS01867-
HS01868MULTI-COPPER OXIDASE
HS01869UNCHARACTERIZED
HS01870ZINC FINGER PROTEIN 294
HS01871IG-LIKE DOMAIN-CONTAINING PROTEIN
HS01872GC-RICH SEQUENCE DNA-BINDING FACTOR
HS01873INNER MEMBRANE TRANSPORTER YGJI-RELATED
HS01874INNER MEMBRANE TRANSPORTER YGJI-RELATED
HS01875
HS01876TOUCAN, ISOFORM A
HS01877BAND 7 PROTEIN-RELATED
HS01878PROLINE AND SERINE-RICH PROTEIN 1
HS01879VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36
HS01880THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
HS01881FIBRINOGEN ALPHA CHAIN
HS01882PHOSPHATASE WITH HOMOLOGY TO TENSIN
HS01883SPHINGOMYELIN PHOSPHODIESTERASE
HS01884SERINE-THREONINE PROTEIN KINASE
HS01885MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
HS01886
HS01887T-CELL SURFACE PROTEIN TACTILE
HS01888B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
HS01889CADHERIN-23
HS01890CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1
HS01891TYROSINASE FAMILY MEMBER
HS01892METABOTROPIC GLUTAMATE RECEPTOR
HS01893RAB FAMILY
HS01894AGAP004733-PA
HS01895MAP3K7 C-TERMINAL-LIKE PROTEIN
HS01896IONOTROPIC GLUTAMATE RECEPTOR
HS01897TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG
HS01898SUPEROXIDE DISMUTASE CU-ZN -RELATED
HS01899
HS01900RNA PROCESSING PROTEIN LD23810P
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