About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01601UNCHARACTERIZED
HS01602
HS01603FER-1-LIKE
HS01604AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT
HS01605TUBULIN POLYGLUTAMYLASE
HS01606SI:CH211-67E16.11
HS01607SERINE/THREONINE-PROTEIN KINASE 17
HS01608RHO GUANINE EXCHANGE FACTOR-RELATED
HS01609
HS01610ARYL HYDROCARBON RECEPTOR
HS01611DEOXYNUCLEOSIDE KINASE
HS01612
HS01613PIKACHURIN-LIKE PROTEIN
HS01614
HS016152-HYDROXYACID DEHYDROGENASE-RELATED
HS01616PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
HS01617BUTYROPHILIN
HS01618BONUS, ISOFORM C-RELATED
HS01619MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
HS01620
HS01621PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44
HS01622
HS01623
HS01624GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
HS01625REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS01626WD REPEAT CONTAINING PROTEIN 3 WDR3
HS01627T-BOX PROTEIN-RELATED
HS01628TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL
HS01629S -2-HYDROXY-ACID OXIDASE-RELATED
HS01630LD33804P
HS01631BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
HS01632LIPASE
HS01633POPEYE DOMAIN CONTAINING PROTEIN
HS01634CYTOCHROME C OXIDASE COPPER CHAPERONE
HS01635I[[H]] CHANNEL, ISOFORM E
HS01636REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS01637RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN
HS01638SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 3
HS01639EXPORTIN 4,7-RELATED
HS01640
HS01641UNCHARACTERIZED
HS01642
HS01643RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN
HS01644
HS01645CENTROMERE PROTEIN E
HS01646ENHANCER OF POLYCOMB
HS01647TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
HS01648HISTONE H4 TRANSCRIPTION FACTOR-RELATED
HS01649GLYCOSYLTRANSFERASE-LIKE 1
HS01650IMMUNOGLOBULIN
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