About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01651MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
HS01652
HS01653POL PROTEIN
HS01654TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
HS01655IMMUNOGLOBULIN
HS01656UBIQUITIN-CONJUGATING ENZYME E2
HS01657THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAINING
HS01658REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS01659
HS01660
HS01661REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS01662
HS01663IMMUNOGLOBULIN
HS01664CONTACTIN 5
HS01665MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
HS01666
HS01667ECTO-NOX DISULFIDE-THIOL EXCHANGER
HS01668UNCHARACTERIZED PROTEIN YFIH
HS01669LEISHMANOLYSIN-LIKE PEPTIDASE
HS01670TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
HS01671PROTEASE S51 ALPHA-ASPARTYL DIPEPTIDASE
HS01672INTEGRIN ALPHA
HS01673DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 12
HS01674
HS01675
HS01676LD41958P
HS01677DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED
HS01678OLIGOPEPTIDE TRANSPORTER-RELATED
HS01679SERINE PROTEASE INHIBITOR, SERPIN
HS01680TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X
HS01681
HS01682HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
HS01683-
HS01684
HS01685JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
HS01686VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE
HS01687ADENYLATE CYCLASE TYPE 1
HS01688LONGIN DOMAIN-CONTAINING PROTEIN
HS01689PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED
HS01690VIRAL IAP-ASSOCIATED FACTOR HOMOLOG
HS01691RING FINGER PROTEIN 127
HS01692RING FINGER PROTEIN 127
HS01693NEBULIN
HS01694NEBULIN
HS01695SEMAPHORIN
HS01696SI:CH211-178J18.4-RELATED
HS01697
HS01698INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG
HS016993-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN
HS01700CONNEXIN
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