About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01551
HS01552CELL CYCLE CONTROL PROTEIN CWF22-RELATED
HS01553SPERM SPECIFIC ANTIGEN 2-RELATED
HS01554BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
HS01555SPHINGOSINE KINASE
HS01556INTEGRIN ALPHA
HS01557RIBOSOMAL PROTEIN L2
HS01558UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS01559MEDIATOR COMPLEX SUBUNIT
HS01560THAP DOMAIN PROTEIN
HS01561SERINE/THREONINE-PROTEIN KINASE
HS01562EXPORTIN 4,7-RELATED
HS0156310 KDA HEAT SHOCK PROTEIN
HS0156460 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL
HS01565SPERM PROTEIN HOMOLOG
HS01566
HS01567SPLICING FACTOR 3B, SUBUNIT 1-RELATED
HS01568ANKYRIN REPEAT-CONTAINING
HS01569ANKYRIN REPEAT CONTAINING
HS015701-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
HS01571BETA/GAMMA CRYSTALLIN
HS01572SHUGOSHIN
HS01573BETA/GAMMA CRYSTALLIN
HS01574BETA/GAMMA CRYSTALLIN
HS01575BETA/GAMMA CRYSTALLIN
HS01576BETA/GAMMA CRYSTALLIN
HS01577BETA/GAMMA CRYSTALLIN
HS01578BETA/GAMMA CRYSTALLIN
HS01579BETA/GAMMA CRYSTALLIN
HS01580BETA/GAMMA CRYSTALLIN
HS01581BETA/GAMMA CRYSTALLIN
HS01582DIACYLGLYCEROL KINASE
HS01583
HS01584E3 UBIQUITIN-PROTEIN LIGASE TTC3
HS01585INTEGRIN BETA SUBUNIT
HS01586CUBILIN-LIKE PROTEIN
HS01587TELOMERE-ASSOCIATED PROTEIN RIF1
HS01588COLLAGEN ALPHA
HS01589GROWTH FACTOR RECEPTOR-BOUND PROTEIN
HS01590REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS01591ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
HS01592
HS01593HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS01594HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS01595HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS01596ALPHA-TECTORIN-RELATED
HS01597HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS01598HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS01599HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS01600FER-1-LIKE
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