About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01701ZINC FINGER MYM-TYPE PROTEIN
HS01702
HS01703ROLLING PEBBLES, ISOFORM B
HS01704SET DOMAIN-CONTAINING PROTEIN-RELATED
HS01705TRANSCRIPTION TERMINATION FACTOR 2-RELATED
HS01706T COMPLEX PROTEIN 10
HS01707RING FINGER PROTEIN 17
HS01708RING FINGER PROTEIN 17
HS01709INTERLEUKIN-1 RECEPTOR FAMILY MEMBER
HS01710
HS01711
HS01712G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
HS01713PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
HS01714SH3 MULTIPLE DOMAIN
HS01715NEUROTRANSMITTER GATED ION CHANNEL
HS01716NEUROTRANSMITTER GATED ION CHANNEL
HS01717NEUROTRANSMITTER GATED ION CHANNEL
HS01718ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS01719NEUROTRANSMITTER GATED ION CHANNEL
HS01720CYCLINS
HS01721SEPTIN
HS01722UNCHARACTERIZED
HS01723APICAL PROTEIN/SHROOM-RELATED
HS01724
HS01725
HS01726AF4/FMR2 FAMILY MEMBER
HS01727
HS01728
HS01729HSC70CB, ISOFORM G-RELATED
HS01730RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
HS01731PLACENTAL PROTEIN 11-RELATED
HS01732NEDD4 FAMILY INTERACTING PROTEIN 1/2
HS01733SPROUTY
HS01734
HS01735FIBROBLAST GROWTH FACTOR
HS01736
HS01737
HS01738KNIRPS-RELATED PROTEIN-RELATED
HS01739GOLGI MEMBRANE PROTEIN YIP1
HS01740POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
HS01741REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS01742GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 2
HS01743DUF614 FAMILY PROTEIN-RELATED
HS01744LEUCYL-TRNA SYNTHETASE
HS01745RNA RECOGNITION RRM/RNP DOMAIN
HS01746POU DOMAIN
HS01747RAD50
HS01748REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS01749ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS01750HOMEOBOX PROTEIN MSX
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