About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01751NEURONAL VESICLE TRAFFICKING-ASSOCIATED PROTEIN 2-RELATED
HS01752EGF-LIKE DOMAIN-CONTAINING PROTEIN
HS01753
HS01754ZINC FINGER PROTEIN
HS01755LD33804P
HS01756WD REPEAT DOMAIN 44
HS01757RNA PROCESSING PROTEIN LD23810P
HS01758-
HS01759CYTOKINE RECEPTOR
HS01760P53-INDUCED PROTEIN RELATED
HS01761DOUBLECORTIN DOMAIN CONTAINING 2
HS01762CALPAIN
HS01763SERINE/THREONINE-PROTEIN KINASE TAO
HS01764BICOID-INTERACTING PROTEIN RELATED
HS01765BICOID-INTERACTING PROTEIN RELATED
HS01766
HS01767SPERM ASSOCIATED ANTIGEN 7
HS01768VWFC DOMAIN-CONTAINING PROTEIN
HS01769X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
HS01770SIALIDASE
HS01771HYPERKINETIC, ISOFORM M
HS01772HYPERKINETIC, ISOFORM M
HS01773EPH RECEPTOR A5
HS01774DISCS LARGE
HS01775AGAP004733-PA
HS01776ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED
HS01777GDNF RECEPTOR ALPHA
HS01778CELL DIVISION CYCLE 16,23,27
HS01779KINESIN-RELATED
HS01780PHD-TYPE DOMAIN-CONTAINING PROTEIN
HS01781CALCIUM-SENSING RECEPTOR-RELATED
HS01782BETA-1,4-GALACTOSYLTRANSFERASE
HS01783CDC42 GTPASE-ACTIVATING PROTEIN
HS01784GS HOMEOBOX 2
HS01785WASP-1
HS01786V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A
HS01787ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
HS01788LIPOCALIN
HS01789ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
HS01790LIPOCALIN
HS01791FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
HS01792THIOREDOXIN PEROXIDASE
HS01793PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR
HS01794MICROTUBULE-ASSOCIATED PROTEIN
HS01795
HS01796
HS01797
HS01798LIPASE
HS01799CYTIDYLYLTRANSFERASE
HS01800PALMITOYLTRANSFERASE ZDHHC16
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