About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS01951CYTOCHROME C OXIDASE ASSEMBLY FACTOR 4 HOMOLOG, MITOCHONDRIAL
HS01952OLFACTORY RECEPTOR 56B1-RELATED
HS01953LP06937P
HS01954SET AND MYND DOMAIN-CONTAINING PROTEIN 4
HS01955REPLICATION FACTOR A 1, RFA1
HS01956SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
HS01957ESTERASE OVCA2
HS01958SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
HS01959SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN
HS01960NG37
HS01961CORONIN
HS01962SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG
HS01963NUCLEAR SPECKLE SPLICING REGULATORY PROTEIN 1
HS01964CALPAIN
HS01965RAS-RELATED PROTEIN RAB
HS01966TRANSCRIPTION ELONGATION FACTOR SPT6
HS01967STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN
HS01968CALCIUM-BINDING PROTEIN 8-RELATED
HS01969CEREBELLIN-RELATED
HS01970METHYLTRANSFERASE
HS01971MERLIN/MOESIN/EZRIN/RADIXIN
HS01972CLAUDIN
HS01973CLAUDIN
HS01974CLAUDIN
HS01975CLAUDIN
HS01976CLAUDIN
HS01977CLAUDIN
HS01978CLAUDIN
HS01979CLAUDIN
HS01980PROTEIN ABHD11
HS01981BICD FAMILY-LIKE CARGO ADAPTER
HS01982SULFATASE MODIFYING FACTOR 1, 2
HS01983CHAPERONIN
HS01984NIPSNAP-RELATED
HS0198528S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL
HS01986
HS01987LIM DOMAIN KINASE 1
HS01988SEPTIN
HS01989MAX DIMERIZATION, MAD
HS01990WD REPEAT-CONTAINING PROTEIN POP1
HS01991COILED-COIL DOMAIN-CONTAINING 74A
HS01992PROTEIN CBG16327
HS01993PROTEIN CBG16327
HS01994PROTEIN LIAT1
HS01995NG5
HS01996GOS-28 SNARE- RELATED
HS01997BETA/GAMMA CRYSTALLIN
HS01998RETINAL PROTEIN 4
HS01999SOLUTE CARRIER FAMILY 13 MEMBER
HS02000HEMOPEXIN DOMAIN-CONTAINING PROTEIN
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