About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS02101
HS02102ARSENITE-RESISTANCE PROTEIN 2
HS02103ARSENITE-RESISTANCE PROTEIN 2
HS02104
HS02105RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED
HS02106
HS02107CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS
HS02108NACHT, LRR AND CARD DOMAINS-CONTAINING
HS02109RNF121 PROTEIN
HS02110TRANSIENT RECEPTOR POTENTIAL CHANNEL
HS02111RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
HS02112G-PROTEIN COUPLED RECEPTOR
HS02113LYSOPHOSPHATIDIC ACID RECEPTOR 5/SPHINGOSYLPHOSPHORYLCHOLINE RECEPTOR
HS02114
HS02115SODIUM/CHLORIDE DEPENDENT TRANSPORTER
HS02116TRANSCRIPTION INITIATION FACTOR TFIID
HS02117LD21662P
HS02118MYOTUBULARIN-RELATED
HS02119CELL CYCLE CONTROL PROTEIN CWF15
HS02120TRANSPOSON
HS02121MYELIN PROTEOLIPID
HS02122NEUROLIGIN
HS02123COILED-COIL ALPHA-HELICAL ROD PROTEIN 1
HS02124IONOTROPIC GLUTAMATE RECEPTOR
HS02125THO2 PROTEIN
HS02126STROMAL ANTIGEN
HS02127MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
HS02128-
HS02129MYOSIN
HS02130RHO GTPASE-ACTIVATING PROTEIN 190
HS02131BASIGIN RELATED
HS02132MYELIN P0 RELATED
HS02133MYELIN P0 RELATED
HS02134PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
HS02135CALPONIN
HS02136CONNEXIN
HS02137RAS-RELATED PROTEIN RAB
HS02138DNAJ HOMOLOG SUBFAMILY C MEMBER
HS02139MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
HS02140G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS02141NECTIN-RELATED
HS02142RETICULON-LIKE PROTEIN
HS02143PROTEIN PHOSPHATASE 2C
HS02144POTASSIUM CHANNEL, SUBFAMILY K
HS02145INOSITOL POLYPHOSPHATE KINASE
HS02146YEAST SPT2-RELATED
HS02147RAD54-LIKE
HS02148FIMBRIN/PLASTIN
HS02149CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
HS02150RAS-RELATED GTP BINDING RAG/GTR YEAST
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