About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS02201OVOCHYMASE-RELATED
HS02202ENDONUCLEASE-RELATED
HS02203SYNAPTOBREVIN FAMILY MEMBER
HS02204MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
HS02205GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
HS02206
HS02207V-SET AND IMMUNOGLOBULIN DOMAIN-CONTAINING PROTEIN 1
HS02208NEUROTRANSMITTER GATED ION CHANNEL
HS02209REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS02210NEUROTRANSMITTER GATED ION CHANNEL
HS02211UNCHARACTERIZED
HS02212AMMECR1 HOMOLOG
HS02213CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
HS02214ADENYLOSUCCINATE SYNTHETASE
HS02215POTASSIUM CHANNEL, SUBFAMILY K
HS02216KNIRPS-RELATED PROTEIN-RELATED
HS02217PEROXIREDOXIN
HS02218BARRIER TO AUTOINTEGRATION FACTOR 2
HS02219FLOTILLIN-RELATED
HS02220GTPASE ERA
HS02221SUGAR KINASE
HS02222UNCHARACTERIZED
HS02223TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
HS02224UNCHARACTERIZED
HS02225P2X PURINOCEPTOR
HS02226REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS02227UBIQUITIN
HS02228CENTROMERE PROTEIN V
HS02229N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED
HS02230NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR
HS02231ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7
HS02232OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
HS02233CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
HS02234MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22
HS02235BREAKPOINT CLUSTER REGION PROTEIN BCR
HS02236ASPARTOACYLASE
HS02237
HS02238PTD012 PROTEIN
HS02239PTD012 PROTEIN
HS02240A-KINASE ANCHOR PROTEINS
HS02241LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
HS02242SPERMATOGENESIS-ASSOCIATED PROTEIN 22
HS02243TPR REPEAT CONTAINING PROTEIN
HS02244RIBOSOMAL PROTEIN S6 KINASE
HS02245REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS02246AGAP008170-PA
HS02247ZINC FINGER PROTEIN-LIKE 1
HS02248TIGHT JUNCTION-ASSOCIATED PROTEIN 1
HS02249TETRASPANIN
HS02250KREV INTERACTION TRAPPED 1-RELATED
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