About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_016685-T1
LLU|FUN_016686-T1
LLU|FUN_016687-T1
LLU|FUN_016688-T1
LLU|FUN_016689-T1PROTEIN DD3-3
LLU|FUN_016690-T1-
LLU|FUN_016691-T1CAVEOLIN
LLU|FUN_016692-T1ALPHA-N-ACETYLGLUCOSAMINIDASE
LLU|FUN_016693-T1ALPHA-N-ACETYLGLUCOSAMINIDASE
LLU|FUN_016694-T1-
LLU|FUN_016695-T1FATTY ACID SYNTHASE
LLU|FUN_016696-T1
LLU|FUN_016697-T1
LLU|FUN_016698-T1WD REPEAT-CONTAINING PROTEIN 75
LLU|FUN_016699-T1
LLU|FUN_016700-T1
LLU|FUN_016701-T1SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
LLU|FUN_016702-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_016703-T1
LLU|FUN_016704-T1
LLU|FUN_016705-T1
LLU|FUN_016706-T1
LLU|FUN_016707-T1
LLU|FUN_016708-T1GLYCOSYLTRANSFERASE STELLO1-RELATED
LLU|FUN_016709-T1ALKALINE PHOSPHATASE
LLU|FUN_016710-T1TRANSCRIPTIONAL ADAPTER 3-RELATED
LLU|FUN_016711-T1
LLU|FUN_016712-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72
LLU|FUN_016713-T1PROTEIN FOLDING REGULATOR
LLU|FUN_016714-T1HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS
LLU|FUN_016715-T1BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
LLU|FUN_016716-T1
LLU|FUN_016717-T1CYTOCHROME P450 508A4-RELATED
LLU|FUN_016718-T1CYTOCHROME P450 FAMILY 1
LLU|FUN_016719-T1
LLU|FUN_016720-T1RFX TRANSCRIPTION FACTOR FAMILY
LLU|FUN_016721-T1
LLU|FUN_016722-T1
LLU|FUN_016723-T1PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
LLU|FUN_016724-T1
LLU|FUN_016725-T1
LLU|FUN_016726-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_016727-T1
LLU|FUN_016728-T1
LLU|FUN_016729-T1
LLU|FUN_016730-T1
LLU|FUN_016731-T1
LLU|FUN_016732-T1
LLU|FUN_016733-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
LLU|FUN_016734-T1
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