About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_016789-T1
LLU|FUN_016790-T1PROTEIN CBG03580
LLU|FUN_016791-T1
LLU|FUN_016792-T1SOLUTE CARRIER FAMILY 13 MEMBER
LLU|FUN_016793-T1CASPASE
LLU|FUN_016794-T1
LLU|FUN_016795-T1
LLU|FUN_016796-T1
LLU|FUN_016797-T1
LLU|FUN_016798-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_016799-T1
LLU|FUN_016800-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_016801-T1
LLU|FUN_016802-T1
LLU|FUN_016803-T1NADPH OXIDASE
LLU|FUN_016804-T1NADPH OXIDASE
LLU|FUN_016805-T1
LLU|FUN_016806-T1
LLU|FUN_016807-T1
LLU|FUN_016808-T1
LLU|FUN_016809-T1PROTEIN FAM221A-RELATED
LLU|FUN_016810-T1
LLU|FUN_016811-T1
LLU|FUN_016812-T1RGD1565685 PROTEIN
LLU|FUN_016813-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_016814-T1
LLU|FUN_016815-T1
LLU|FUN_016816-T1GH11358P
LLU|FUN_016817-T1TOLL-LIKE RECEPTOR
LLU|FUN_016818-T1
LLU|FUN_016819-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_016820-T1
LLU|FUN_016821-T1MAD2L1-BINDING PROTEIN
LLU|FUN_016822-T1
LLU|FUN_016823-T1
LLU|FUN_016824-T1UNCHARACTERIZED
LLU|FUN_016825-T1CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5
LLU|FUN_016826-T1
LLU|FUN_016827-T1
LLU|FUN_016828-T1
LLU|FUN_016829-T1OVOCHYMASE-RELATED
LLU|FUN_016830-T1
LLU|FUN_016831-T1
LLU|FUN_016832-T1OVOCHYMASE-RELATED
LLU|FUN_016833-T1
LLU|FUN_016834-T1
LLU|FUN_016835-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
LLU|FUN_016836-T1
LLU|FUN_016837-T1SMARCE1 REGULATOR OF CHROMATIN
LLU|FUN_016838-T1
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