About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_016535-T1
LLU|FUN_016536-T1
LLU|FUN_016537-T1
LLU|FUN_016538-T1
LLU|FUN_016539-T1
LLU|FUN_016540-T1
LLU|FUN_016541-T1
LLU|FUN_016542-T1
LLU|FUN_016543-T1CARBONIC ANHYDRASE
LLU|FUN_016544-T1
LLU|FUN_016545-T1
LLU|FUN_016546-T1
LLU|FUN_016547-T1
LLU|FUN_016548-T1
LLU|FUN_016549-T1
LLU|FUN_016550-T1
LLU|FUN_016551-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_016552-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_016553-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_016554-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_016555-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_016556-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_016557-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_016558-T1
LLU|FUN_016559-T1
LLU|FUN_016560-T1PROTEIN CBG12054-RELATED
LLU|FUN_016561-T1
LLU|FUN_016562-T1DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
LLU|FUN_016563-T1
LLU|FUN_016564-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_016565-T1G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
LLU|FUN_016566-T1P140CAP/SNIP-RELATED
LLU|FUN_016567-T1P140CAP/SNIP-RELATED
LLU|FUN_016568-T1
LLU|FUN_016569-T1
LLU|FUN_016570-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_016571-T1
LLU|FUN_016572-T1
LLU|FUN_016573-T1
LLU|FUN_016574-T1
LLU|FUN_016575-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_016576-T1ANNEXIN
LLU|FUN_016577-T1ENDORIBONUCLEASE YBEY, CHLOROPLASTIC
LLU|FUN_016578-T1
LLU|FUN_016579-T1
LLU|FUN_016580-T1
LLU|FUN_016581-T1MUCIN 4-RELATED
LLU|FUN_016582-T1ANGIOTENSIN-CONVERTING ENZYME
LLU|FUN_016583-T1ANGIOTENSIN-CONVERTING ENZYME
LLU|FUN_016584-T1OS12G0596101 PROTEIN
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