About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_016585-T1
LLU|FUN_016586-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_016587-T1PERIOSTIN-RELATED
LLU|FUN_016588-T1
LLU|FUN_016589-T1METALLO PHOSPHOESTERASE RELATED
LLU|FUN_016590-T1
LLU|FUN_016591-T1
LLU|FUN_016592-T1
LLU|FUN_016593-T1ZINC FINGER AND SCAN DOMAIN-CONTAINING
LLU|FUN_016594-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_016595-T1ZINC FINGER AND SCAN DOMAIN-CONTAINING
LLU|FUN_016596-T1-
LLU|FUN_016597-T1-
LLU|FUN_016598-T1-
LLU|FUN_016599-T1
LLU|FUN_016600-T1
LLU|FUN_016601-T1FAS-ASSOCIATED PROTEIN
LLU|FUN_016602-T1SELENOPROTEIN T
LLU|FUN_016603-T1MEIOSIS 1 ARREST PROTEIN
LLU|FUN_016604-T1MEIOSIS 1 ARREST PROTEIN
LLU|FUN_016605-T1
LLU|FUN_016606-T1CALPAIN
LLU|FUN_016607-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
LLU|FUN_016608-T1TRYPTOPHANYL-TRNA SYNTHETASE
LLU|FUN_016609-T1TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN
LLU|FUN_016610-T1KNIRPS-RELATED PROTEIN-RELATED
LLU|FUN_016611-T1
LLU|FUN_016612-T1
LLU|FUN_016613-T1KNIRPS-RELATED PROTEIN-RELATED
LLU|FUN_016614-T1KNIRPS-RELATED PROTEIN-RELATED
LLU|FUN_016615-T1KNIRPS-RELATED PROTEIN-RELATED
LLU|FUN_016616-T1
LLU|FUN_016617-T1KNIRPS-RELATED PROTEIN-RELATED
LLU|FUN_016618-T1
LLU|FUN_016619-T1
LLU|FUN_016620-T1
LLU|FUN_016621-T1KNIRPS-RELATED PROTEIN-RELATED
LLU|FUN_016622-T1
LLU|FUN_016623-T1INNER MEMBRANE PROTEIN YEDE
LLU|FUN_016624-T1INNER MEMBRANE PROTEIN YEDE
LLU|FUN_016625-T1G PATCH DOMAIN CONTAINING PROTEIN 2
LLU|FUN_016626-T1TESTIS-EXPRESSED PROTEIN 43
LLU|FUN_016627-T1-
LLU|FUN_016628-T1
LLU|FUN_016629-T1PEROXIREDOXIN
LLU|FUN_016630-T15'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT
LLU|FUN_016631-T1
LLU|FUN_016632-T1
LLU|FUN_016633-T1
LLU|FUN_016634-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
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