About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_016839-T1
LLU|FUN_016840-T1TUMOR PROTEIN P53-INDUCIBLE PROTEIN 11
LLU|FUN_016841-T1
LLU|FUN_016842-T1
LLU|FUN_016843-T1
LLU|FUN_016844-T1
LLU|FUN_016845-T1
LLU|FUN_016846-T1
LLU|FUN_016847-T1
LLU|FUN_016848-T1
LLU|FUN_016849-T1FOUR-JOINTED BOX PROTEIN 1
LLU|FUN_016850-T1TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 1
LLU|FUN_016851-T1DENN DOMAIN-CONTAINING PROTEIN 2
LLU|FUN_016852-T160S RIBOSOMAL PROTEIN L27A
LLU|FUN_016853-T1POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
LLU|FUN_016854-T1
LLU|FUN_016855-T1
LLU|FUN_016856-T1CHOLINE/ETHANOALAMINE KINASE
LLU|FUN_016857-T1PROTEIN LIN-7 HOMOLOG
LLU|FUN_016858-T1
LLU|FUN_016859-T1RAS-LIKE FAMILY MEMBER 11
LLU|FUN_016860-T1
LLU|FUN_016861-T1
LLU|FUN_016862-T1
LLU|FUN_016863-T1
LLU|FUN_016864-T1
LLU|FUN_016865-T1
LLU|FUN_016866-T1
LLU|FUN_016867-T1
LLU|FUN_016868-T1
LLU|FUN_016869-T1
LLU|FUN_016870-T1
LLU|FUN_016871-T1
LLU|FUN_016872-T1
LLU|FUN_016873-T1
LLU|FUN_016874-T1FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
LLU|FUN_016877-T1CALPAIN
LLU|FUN_016879-T1
LLU|FUN_016880-T1
LLU|FUN_016881-T1
LLU|FUN_016883-T1OS10G0105400 PROTEIN
LLU|FUN_016884-T1STANNIOCALCIN
LLU|FUN_016885-T1
LLU|FUN_016886-T1
LLU|FUN_016887-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
LLU|FUN_016888-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
LLU|FUN_016889-T1
LLU|FUN_016890-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_016891-T1
LLU|FUN_016892-T1
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