Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8013321.1 | |
| CAI8013325.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013323.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013326.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013324.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013327.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013331.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013332.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013333.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013329.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013328.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013322.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013330.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8013334.1 | |
| CAI8013335.1 | |
| CAI8013336.1 | |
| CAI8013337.1 | WD REPEAT DOMAIN-RELATED |
| CAI8013338.1 | WD REPEAT DOMAIN-RELATED |
| CAI8013339.1 | WD REPEAT DOMAIN-RELATED |
| CAI8013341.1 | UNCHARACTERIZED |
| CAI8013340.1 | |
| CAI8013342.1 | METHYL-CPG-BINDING PROTEIN |
| CAI8013343.1 | PRE-MRNA-SPLICING FACTOR ISY1 |
| CAI8013344.1 | MALATE AND LACTATE DEHYDROGENASE |
| CAI8013345.1 | |
| CAI8013346.1 | |
| CAI8013347.1 | DELTA(14)-STEROL REDUCTASE |
| CAI8013349.1 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| CAI8013348.1 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| CAI8013350.1 | RAS-RELATED PROTEIN RAB |
| CAI8013354.1 | ANKYRIN REPEAT PROTEIN |
| CAI8013353.1 | ANKYRIN REPEAT AND DEATH DOMAIN-CONTAINING PROTEIN |
| CAI8013352.1 | |
| CAI8013351.1 | |
| CAI8013355.1 | LIPASE |
| CAI8013359.1 | |
| CAI8013358.1 | |
| CAI8013357.1 | |
| CAI8013356.1 | |
| CAI8013361.1 | ANKYRIN REPEAT FAMILY A |
| CAI8013362.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8013360.1 | |
| CAI8013363.1 | TRANSPOSASE INSH FOR INSERTION SEQUENCE ELEMENT IS5A-RELATED |
| CAI8013364.1 | |
| CAI8013365.1 | POTASSIUM CHANNEL RELATED |
| CAI8013367.1 | |
| CAI8013366.1 | |
| CAI8013368.1 | |
| CAI8013371.1 | |
| CAI8013369.1 |
