Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8013370.1 | |
| CAI8013372.1 | |
| CAI8013373.1 | |
| CAI8013374.1 | |
| CAI8013375.1 | |
| CAI8013376.1 | |
| CAI8013377.1 | |
| CAI8013378.1 | |
| CAI8013379.1 | |
| CAI8013380.1 | |
| CAI8013383.1 | |
| CAI8013382.1 | |
| CAI8013381.1 | |
| CAI8013384.1 | |
| CAI8013387.1 | |
| CAI8013386.1 | |
| CAI8013385.1 | |
| CAI8013388.1 | |
| CAI8013389.1 | |
| CAI8013390.1 | TITIN |
| CAI8013391.1 | CONTACTIN 5 |
| CAI8013392.1 | |
| CAI8013396.1 | |
| CAI8013395.1 | |
| CAI8013394.1 | |
| CAI8013393.1 | |
| CAI8013397.1 | |
| CAI8013399.1 | |
| CAI8013398.1 | |
| CAI8013401.1 | |
| CAI8013400.1 | |
| CAI8013402.1 | |
| CAI8013404.1 | |
| CAI8013403.1 | |
| CAI8013405.1 | |
| CAI8013406.1 | WNT RELATED |
| CAI8013408.1 | ATAXIN-10 |
| CAI8013409.1 | ATAXIN-10 |
| CAI8013407.1 | ATAXIN-10 |
| CAI8013410.1 | ATAXIN-10 |
| CAI8013413.1 | RH59310P |
| CAI8013414.1 | RH59310P |
| CAI8013412.1 | RH59310P |
| CAI8013411.1 | RH59310P |
| CAI8013415.1 | RH59310P |
| CAI8013416.1 | VERY-LONG-CHAIN 3-OXOOACYL-COA REDUCTASE |
| CAI8013421.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| CAI8013423.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| CAI8013422.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| CAI8013420.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
