Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8012871.1 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
| CAI8012872.1 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
| CAI8012873.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI8012875.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8012874.1 | |
| CAI8012876.1 | |
| CAI8012877.1 | FIBRILLIN-RELATED |
| CAI8012881.1 | UNCHARACTERIZED |
| CAI8012879.1 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
| CAI8012878.1 | |
| CAI8012880.1 | UNCHARACTERIZED |
| CAI8012882.1 | UNCHARACTERIZED |
| CAI8012884.1 | UNCHARACTERIZED |
| CAI8012883.1 | UNCHARACTERIZED |
| CAI8012886.1 | UNCHARACTERIZED |
| CAI8012885.1 | UNCHARACTERIZED |
| CAI8012887.1 | UNCHARACTERIZED |
| CAI8012888.1 | |
| CAI8012889.1 | |
| CAI8012890.1 | ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE |
| CAI8012894.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012896.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012897.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012895.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012893.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012892.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012891.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012898.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| CAI8012899.1 | MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8 |
| CAI8012900.1 | |
| CAI8012901.1 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| CAI8012904.1 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| CAI8012905.1 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| CAI8012903.1 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| CAI8012902.1 | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN |
| CAI8012908.1 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| CAI8012907.1 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| CAI8012906.1 | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN |
| CAI8012909.1 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| CAI8012910.1 | |
| CAI8012911.1 | |
| CAI8012913.1 | TRANSMEMBRANE PROTEIN 59-LIKE PROTEIN |
| CAI8012912.1 | TRANSMEMBRANE PROTEIN 59-LIKE PROTEIN |
| CAI8012914.1 | |
| CAI8012915.1 | |
| CAI8012916.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8012917.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8012918.1 | FAD-BINDING PROTEIN |
| CAI8012919.1 | |
| CAI8012920.1 |
