Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8012671.1 | ALMS1-RELATED |
| CAI8012672.1 | TRANSMEMBRANE PROTEIN 128 |
| CAI8012673.1 | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 |
| CAI8012674.1 | |
| CAI8012676.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8012675.1 | |
| CAI8012677.1 | NUDIX HYDROLASE |
| CAI8012679.1 | SIDEROFLEXIN |
| CAI8012681.1 | SIDEROFLEXIN |
| CAI8012680.1 | SIDEROFLEXIN |
| CAI8012678.1 | SIDEROFLEXIN |
| CAI8012682.1 | |
| CAI8012684.1 | |
| CAI8012683.1 | |
| CAI8012686.1 | TESTIS DEVELOPMENT PROTEIN PRTD |
| CAI8012685.1 | TESTIS DEVELOPMENT PROTEIN PRTD |
| CAI8012687.1 | |
| CAI8012688.1 | TESTIS DEVELOPMENT PROTEIN PRTD |
| CAI8012689.1 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
| CAI8012690.1 | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) |
| CAI8012691.1 | C2 DOMAIN-CONTAINING PROTEIN |
| CAI8012693.1 | |
| CAI8012692.1 | |
| CAI8012694.1 | TYROSINE-PROTEIN KINASE HOPSCOTCH |
| CAI8012696.1 | BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1A |
| CAI8012695.1 | |
| CAI8012698.1 | ADENYLOSUCCINATE SYNTHETASE |
| CAI8012697.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| CAI8012699.1 | BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR |
| CAI8012700.1 | |
| CAI8012703.1 | BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR |
| CAI8012704.1 | BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR |
| CAI8012702.1 | BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR |
| CAI8012701.1 | BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR |
| CAI8012706.1 | POLYGLUTAMINE SYNTHESIS ACCESSORY PROTEIN RV0574C-RELATED |
| CAI8012705.1 | POLYGLUTAMINE SYNTHESIS ACCESSORY PROTEIN RV0574C-RELATED |
| CAI8012707.1 | NF-KAPPA-B INHIBITOR ALPHA |
| CAI8012708.1 | N-ALPHA-ACETYLTRANSFERASE 40 |
| CAI8012714.1 | UNCHARACTERIZED |
| CAI8012713.1 | UNCHARACTERIZED |
| CAI8012711.1 | UNCHARACTERIZED |
| CAI8012710.1 | UNCHARACTERIZED |
| CAI8012709.1 | UNCHARACTERIZED |
| CAI8012715.1 | UNCHARACTERIZED |
| CAI8012712.1 | UNCHARACTERIZED |
| CAI8012717.1 | UNCHARACTERIZED |
| CAI8012716.1 | UNCHARACTERIZED |
| CAI8012720.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| CAI8012719.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| CAI8012718.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
