Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8012621.1 | PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P |
| CAI8012622.1 | |
| CAI8012623.1 | RAN GTPASE-ACTIVATING PROTEIN 1 |
| CAI8012626.1 | |
| CAI8012625.1 | |
| CAI8012624.1 | |
| CAI8012627.1 | |
| CAI8012628.1 | |
| CAI8012629.1 | |
| CAI8012630.1 | |
| CAI8012631.1 | |
| CAI8012632.1 | G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP |
| CAI8012633.1 | G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP |
| CAI8012637.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8012636.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8012635.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8012634.1 | |
| CAI8012638.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8012639.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8012640.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8012641.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8012642.1 | |
| CAI8012646.1 | |
| CAI8012645.1 | |
| CAI8012644.1 | |
| CAI8012643.1 | |
| CAI8012647.1 | |
| CAI8012649.1 | ACYL-COA DEHYDROGENASE |
| CAI8012648.1 | ACYL-COA DEHYDROGENASE |
| CAI8012650.1 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8012651.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| CAI8012652.1 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
| CAI8012654.1 | DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| CAI8012653.1 | DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| CAI8012655.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8012656.1 | 60S RIBOSOMAL PROTEIN L37 |
| CAI8012657.1 | 60S RIBOSOMAL PROTEIN L37 |
| CAI8012658.1 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN |
| CAI8012660.1 | LYMPHOCYTE EXPANSION MOLECULE |
| CAI8012659.1 | LYMPHOCYTE EXPANSION MOLECULE |
| CAI8012661.1 | LYMPHOCYTE EXPANSION MOLECULE |
| CAI8012662.1 | |
| CAI8012663.1 | |
| CAI8012664.1 | |
| CAI8012665.1 | INNER MEMBRANE ABC TRANSPORTER |
| CAI8012666.1 | OS01G0149700 PROTEIN |
| CAI8012667.1 | LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 |
| CAI8012668.1 | |
| CAI8012669.1 | |
| CAI8012670.1 | DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19 |
