Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8012822.1 | GABA-B RECEPTOR |
| CAI8012820.1 | GABA-B RECEPTOR |
| CAI8012821.1 | GABA-B RECEPTOR |
| CAI8012824.1 | GABA-B RECEPTOR |
| CAI8012825.1 | GABA-B RECEPTOR |
| CAI8012826.1 | GABA-B RECEPTOR |
| CAI8012827.1 | GABA-B RECEPTOR |
| CAI8012829.1 | ARYLSULFATASE FAMILY MEMBER |
| CAI8012828.1 | ARYLSULFATASE FAMILY MEMBER |
| CAI8012830.1 | |
| CAI8012831.1 | GLYOXALASE-RELATED |
| CAI8012832.1 | |
| CAI8012833.1 | |
| CAI8012834.1 | PROTEIN LPLB |
| CAI8012835.1 | BLL4140 PROTEIN |
| CAI8012836.1 | BLL4140 PROTEIN |
| CAI8012837.1 | ABC TRANSPORTER PERMEASE PROTEIN MG189-RELATED-RELATED |
| CAI8012838.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8012839.1 | ASPARTATE AMINOTRANSFERASE |
| CAI8012840.1 | GABA-B RECEPTOR |
| CAI8012841.1 | |
| CAI8012842.1 | NETRIN/LAMININ-RELATED |
| CAI8012843.1 | OXIDOREDUCTASE HTATIP2 |
| CAI8012844.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8012845.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8012846.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8012847.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8012848.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| CAI8012849.1 | |
| CAI8012850.1 | |
| CAI8012851.1 | |
| CAI8012852.1 | |
| CAI8012855.1 | GUANYLYL CYCLASE |
| CAI8012854.1 | GUANYLYL CYCLASE |
| CAI8012853.1 | GUANYLYL CYCLASE |
| CAI8012856.1 | |
| CAI8012857.1 | AP COMPLEX SUBUNIT MU |
| CAI8012860.1 | UNCHARACTERIZED |
| CAI8012859.1 | UNCHARACTERIZED |
| CAI8012858.1 | |
| CAI8012862.1 | UNCHARACTERIZED |
| CAI8012861.1 | UNCHARACTERIZED |
| CAI8012864.1 | WD-REPEAT PROTEIN 18 |
| CAI8012863.1 | WD-REPEAT PROTEIN 18 |
| CAI8012865.1 | WD-REPEAT PROTEIN 18 |
| CAI8012866.1 | WD-REPEAT PROTEIN 18 |
| CAI8012867.1 | WD-REPEAT PROTEIN 18 |
| CAI8012868.1 | WD-REPEAT PROTEIN 18 |
| CAI8012869.1 | WD-REPEAT PROTEIN 18 |
| CAI8012870.1 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
